Job Description Q46948 Confidence 56.18% Date Thu Jan 5 12:36:06 GMT 2012 Rank 94 Aligned Residues 106 % Identity 18% Template c2zkiH_ PDB info PDB header:transcription Chain: H: PDB Molecule:199aa long hypothetical trp repressor binding PDBTitle: crystal structure of hypothetical trp repressor binding2 protein from sul folobus tokodaii (st0872) Resolution 2.90 Å

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		2	.	.	.	.	.	.	.	10		.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.		.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure											.																																																							.
Query SS confidence											.																																																							.
Query Sequence		S	A	S	A	L	V	C	L	A	.	P	G	S	E	E	T	E	A	V	T	T	I	D	L	L	V	R	G	G	I	K	V	T	T	A	S	V	A	S	D	G	N	L	A	I	T	C	S	R	G	V	K	L	L	A	D	A	P	L	V	E	V	A	D	.	G	E	Y	D	V	I	V	L	P	G	G	I	K	G	A
Query Conservation											.																																																							.
Alig confidence											.																																																							.										.	.	.
Template Conservation																																																																												.	.	.
Template Sequence		K	P	N	I	L	V	L	F	Y	G	Y	G	S	I	V	E	L	A	K	E	I	G	K	G	A	E	E	A	G	A	E	V	K	I	R	R	V	R	E	T	L	P	P	E	F	Q	S	R	I	P	F	D	K	V	K	D	I	P	E	V	T	L	D	D	M	R	W	A	D	G	F	A	I	G	.	.	.	S	P	T
Template Known Secondary structure												S	S																	T												S		G	G	G		T	T			G	G	G	S	T	T	S		B										S						.	.	.
Template Predicted Secondary structure																																																																												.	.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.				.	.	80
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.								.	.	100	.	.	.	.	.	.	.	.	.	110
Predicted Secondary structure																				.	.	.	.	.	.	.
Query SS confidence																				.	.	.	.	.	.	.
Query Sequence		E	C	F	R	D	S	T	L	L	V	E	T	V	K	Q	F	H	R	.	.	.	.	.	.	.	S	G	R	I	V	A	A	I	C	A	A	P	A
Query Conservation																				.	.	.	.	.	.	.
Alig confidence																				.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	Y	G	N	M	A	G	G	L	K	T	F	L	D	T	T	A	I	L	W	K	D	N	V	L	Y	G	K	P	V	T	F	F	T	E	A	S	T
Template Known Secondary structure		B	T	T	B											T	T					T	T	T	T	T	T	T									B	S	S
Template Predicted Secondary structure
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions