Return to main results Retrieve Phyre Job Id

Job DescriptionP37746
Confidence2.08%DateThu Jan 5 11:57:22 GMT 2012
Rank17Aligned Residues387
% Identity10%Templated1pw4a_
SCOP infoMFS general substrate transporter MFS general substrate transporter Glycerol-3-phosphate transporter
Resolution3.30

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  NTNKLSLRRNVIYLAVVQGSNYLLPLLTFPYLVRTL. . . . . . . . GPENFGIFGFCQATMLYMIMFVEYGFNLTATQSIAK
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Template Sequence  AEIDPTYRRLRWQIFLGIFFGYAAYYLVRKNFALAMPYLVEQGFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRV. .
Template Known Secondary structure  S

TSTTSSTT
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Query Sequence  AADSKDKVTSIFWAVIFSKIVLIVITLIFLTSMTLLVPEYNKHAVIIWSFVPALVGNLIYPIWLFQGKEKMKWLTLSSIL
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Template Sequence  . . . . . . . . . . . . . . FLPAGLILAAAVMLFMGFVPWATSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSV
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SSSSTTT
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Query Sequence  SRLAI. . . . . . . . IPLTFIFVNTKSDIAIAGFIQSSANLVAGIIALAIVVHEGWIGKVTLSLHNVRRSLADGFHVFISTS
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Template Conservation                                                                                  
Template Sequence  WNCAHNVGGGIPPLLFLLGMAWFNDWHAALYMPAFCAILVALFAFAMMRDTPQSCGLPPIEEYKNDTAKQIFMQYVLPNK
Template Known Secondary structure  TST

STT
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Query Sequence  AISLYSTGIVIILGFISGPTSVGNFNAANTIRNALQGLLNPITQAIYPRISSTLVLNRVKGVILIKKSLTCLSLIGGAFS
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Template Conservation                                                          
 
                     
Template Sequence  LLWYIAIANVFVYLLRYGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVT
Template Known Secondary structure  BTTBS


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Query Sequence  LILLLGASILVKISIGPGYDNAVIVLMIISPLPFLISLSNVYGIQVMLTHNYKK. . . . . . . EFSKILIAAGLLSLLLIFP
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Template Sequence  IATIVY. . . . . . . WMNPAGNPTVDMICMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGY
Template Known Secondary structure  T.......TS

TT
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   334..... 340.........350.........360.........370.........380.........390.........400......
 
   379380.........390.........400.........410.
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Query Sequence  LTTLFKEIGAAITLLATECLVTSLMLMFVRNNK
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Template Conservation 
    
                           
Template Sequence  TVDFFGWDGGFMVMIGGSILAVILLIVVMIGEK
Template Known Secondary structure  SS
S
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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