Return to main results Retrieve Phyre Job Id

Job DescriptionP37746
Confidence0.82%DateThu Jan 5 11:57:22 GMT 2012
Rank90Aligned Residues164
% Identity7%Templated1iwga8
SCOP infoMultidrug efflux transporter AcrB transmembrane domain Multidrug efflux transporter AcrB transmembrane domain Multidrug efflux transporter AcrB transmembrane domain
Resolution3.50

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   119120.........130.........140.........150.........160.........170.........180.........190........
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Query Sequence  IIWSFVPALVGNLIYPIWLFQGKEKMKWLTLSSILSRLAIIPLTFIFVNTKSDIAIAGFIQSSANLVAGIIALAIVVHEG
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Template Sequence  APSLYAISLIVVFLCLAALYESWSIPFSVMLVVPLGVIGALLAATFRGLTNDVYFQVGLLTTIGLSAKNAILIVEFAKDL
Template Known Secondary structure  TT
SSSGGGTT

B
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   873......880.........890.........900.........910.........920.........930.........940.........950..
 
   199200.........210.........220.........230.........240.........250.........260.........270........
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Query Sequence  WIGKVTLSLHNVRRSLADGFHVFISTSAISLYSTGIVIILGFISGPTSVGNFNAANTIRNALQGLLNPITQAIYPRISST
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Template Sequence  MDKEGKGLIEATLDAVRMRLRPILMTSLAFILGVMPLVISTGAGS. GAQNAVGTGVMGGMVTATVLAIFFVPVFFVVVRR
Template Known Secondary structure  TTSS


TTTTTT
SSS
.TTTTSSSSSS
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   953......960.........970.........980.........990....... ..1000.........1010.........1020.........1030.
 
   279280...
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Query Sequence  LVLNR
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Template Sequence  RFSRK
Template Known Secondary structure  TS

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   1032....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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