|   |
120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
. | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
V | V | A | A | A | F | E | F | A | F | M | G | G | S | M | G | S | V | V | G | A | R | F | V | R | A | V | E | Q | A | L | E | D | N | C | P | L | I | C | F | S | A | S | G | G | A | R | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
M | Q | E | A | L | M | S | L | M | Q | M | A | K | T | S | A | A | L | A | K | M |
Query Conservation |   |
|   |
|   |
|   |
|
|   |
|   |
|
|
|   |
|   |   |   |
|
|
|
|   |
|   |   |
|   |
|   |   |   |   |
|
|
|
|   |
|   |
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|   |   |
|
|   |   |   |
|
|   |   |   |
|   |   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |
|
|
|
|
|
|   |   |   |
|
|
|   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |
|   |   |
|   |   |
|
|
|   |
|   |
|   |   |   |
|
|
|
|   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |
Template Sequence |   |
I | V | V | L | G | I | N | R | A | Y | G | K | N | S | L | S | K | N | L | I | K | M | L | S | K | A | V | D | A | L | K | S | D | K | K | V | R | T | I | I | I | R | S | E | V | P | G | I | F | C | A | G | A | D | L | K | E | R | A | K | M | S | S | S | E | V | G | P | F | V | S | K | I | R | A | V | I | N | D | I |
Template Known Secondary structure |   |
 |  |  |  |  |  |
|
| G | G | G | T | T |
| B |
| T | T |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| S | S |
| S |  |  |  |  |  |  | S | B | T |  |  |  |  |
|
| B |
|  |  |  |  | T | T | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
89 | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . |
  |
  |   |
188 | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
230 | . | . | . | |
|
. | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 |
Predicted Secondary structure |   |
 |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  | . | . |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Q | E | R | G | L | P | Y | I | S | V | L | T | D | P | T | M | G | G | V | S | A | S | F | A | M | L | G | D | L | N | I | A | E | P | K | A | L | I | G | F | A | G | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
P | R | V | I | . |
. |
E | Q | T | V | R | E | K | L | P | P | G | F | Q | R | S | E | F |
Query Conservation |   |
  |   |   |   |
|
|   |
|
|
|
|   |   |
|
|   |
|
|   |   |
|
|   |
|   |   |   |
|   |
|
|
|   |
|   |
|   |
|
|   |
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
| . | . |
|   |   |   |   |
|   |
|   |
|   |   |
|   |
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |
|
|   |
|
|   |
|   |
|   |
|   |
|   |
| . |   |   |
|   |
|   |   |
|   |   |
|
|   |   |   |
|   |
|   |   |
|
|   |   |   |
|   |   |
|   |   |   |   |   |   |   |
|   |   |   |   |
|   |   |   |
|   |   |
|
|
|   |
|   |   |   |   |
|   |
|
Template Sequence |   |
A | N | L | P | V | P | T | I | A | A | I | D | G | L | A | L | G | G | G | . |
L | E | L | A | L | A | C | D | I | R | V | A | A | S | S | A | K | M | G | L | V | E | T | K | L | A | I | I | P | G | G | G | G | T | Q | R | L | P | R | A | I | G | M | S | L | A | K | E | L | I | F | S | A | R | V | L | D | G | K | E |
Template Known Secondary structure |   |
 | T |
| S | S |
|  |  |  |  |  | S |  |  |  |  | T |  |  | . |  |  |  |  |  |  | S | S |  |  |  |  |  | T | T |
|  |  |  |
|
| G | G | G | G | T |
|
|
|
| S | S |  |  |  |  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  | T |
|  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |
|
|
|
|  |  |  |  |  |
|
|  |  |
|
|  |  | . |  |  |  |  |  |  |
|
|  |  |  |  |
|
|
|
|  |  |
|
|
|  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
169 | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | |
. | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . |
  |
  |   |
251 | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | |
|
|
|
. | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . |
Predicted Secondary structure |   |
 |  |  |
|
|
|
|
|  |  |
|
|  |  |  |  | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | I | E | K | G | A | I | D | M | I | V | R | R | P | E | M | . |
. |
. |
. |
R | L | K | L | A | S | I | L | A | K | L | M | N | L | P |
Query Conservation |   |
  |   |   |   |
|   |
|
|   |
|
|   |   |   |   |   | . | . | . | . |
|   |   |
|   |   |   |
|   |   |
|   |   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |   |
|
|
|   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |
|   |   |   |   |
Template Sequence |   |
A | K | A | V | G | L | I | S | H | V | L | E | Q | N | Q | E | G | D | A | A | Y | R | K | A | L | D | L | A | R | E | F | L | P | Q | G |
Template Known Secondary structure |   |
 |  |  |  | T | S |
| S |  |  |  |
|
|
| T | T | S |
|  |  |  |  |  |  |  |  |  |  |  | T | T | T | T | S |
|
Template Predicted Secondary structure |   |
 |  |  |
|
|
|
|
|  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
248 | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . |
  |