Job Description P0A9Q5 Confidence 98.14% Date Thu Jan 5 11:10:59 GMT 2012 Rank 91 Aligned Residues 158 % Identity 18% Template c3r0oA_ PDB info PDB header:lyase Chain: A: PDB Molecule:carnitinyl-coa dehydratase; PDBTitle: crystal structure of carnitinyl-coa hydratase from mycobacterium avium Resolution 2.10 Å

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		120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.		.	.	.	.	.	.	.	.	160	.	.	.	.														.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.
Predicted Secondary structure																																		.														.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																		.														.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	V	A	A	A	F	E	F	A	F	M	G	G	S	M	G	S	V	V	G	A	R	F	V	R	A	V	E	Q	A	L	E	.	D	N	C	P	L	I	C	F	S	A	S	G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	A	R	M	Q	E	A	L	M	S	L	M	Q	M	A	K	T	S	A	A	L	A
Query Conservation																																		.														.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																		.														.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.
Template Conservation																																																																																.	.
Template Sequence		V	A	L	I	T	I	D	R	P	D	A	R	N	A	V	N	G	A	V	S	T	A	V	G	D	A	L	E	E	A	Q	R	D	P	E	V	W	A	V	V	I	T	G	A	G	D	K	S	F	C	A	G	A	D	L	K	A	I	S	R	G	E	N	L	Y	H	A	E	H	P	E	W	G	F	A	G	Y	V	.	.
Template Known Secondary structure										G	G	G	T	T		B																			T	T									S	S	S	S	B	S				B							T	T				S		S	S		G	G	G		G	G	G	T	T	.	.
Template Predicted Secondary structure																																																																																.	.
Template SS confidence
		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
		186	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.																230	.	.	.	.	.	.	.	.	.	240	.			.	.	.	.	.	.	.
Predicted Secondary structure																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.
Query SS confidence																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.
Query Sequence		K	M	Q	E	R	G	L	P	Y	I	S	V	L	T	D	P	T	M	G	G	V	S	A	S	F	A	M	L	G	D	L	N	I	A	E	P	K	A	L	I	G	F	A	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	R	V	I	E	Q	T	V	R	E	K	L	.	.	P	P	G	F	Q	R	S
Query Conservation																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.
Alig confidence		.																					.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.
Template Conservation		.																					.
Template Sequence		.	H	H	F	I	D	K	P	T	I	A	A	V	N	G	T	A	L	G	G	G	.	S	E	L	A	L	A	S	D	L	V	I	A	C	E	S	A	S	F	G	L	P	E	V	K	R	G	L	I	A	G	A	G	G	V	F	R	I	V	E	Q	L	P	R	K	V	A	L	E	L	V	L	T	G	E	P	M	T	A
Template Known Secondary structure		.	T				S	S								S	B			T			.							S	S						T	T						G	G	G	G	T	T	S			T	T	T									S
Template Predicted Secondary structure		.																					.
Template SS confidence
			99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.		.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
		249	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	F	L	I	E	K	G	A	I	D	M	I	V	R	R	P	E	M	R	L	K	L	A	S	I	L	A	K	L	M	N	L	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	D	A	L	R	W	G	L	I	N	E	V	V	P	D	G	T	V	V	E	A	A	L	A	L	A	E	R	I	T	C	N	A
Template Known Secondary structure								T	S	S	S					T	T															T	S
Template Predicted Secondary structure
Template SS confidence
		177	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions