 |
Job Description | P0A9Q5 | Confidence | 35.20% | Date | Thu Jan 5 11:10:59 GMT 2012 |
Rank | 213 | Aligned Residues | 17 |
% Identity | 41% | Template | c3lpeF_ |
PDB info |
PDB header:transferase | Chain: F: PDB Molecule:dna-directed rna polymerase subunit e''; |
PDBTitle: crystal structure of spt4/5ngn heterodimer complex from methanococcus2 jannaschii
|
Resolution | 1.90 Å |
|
  |   |
27 | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 |
Predicted Secondary structure |   |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
C | D | S | C | G | Q | V | L | Y | R | A | E | L | E | R | N | L | E | V | C | P | K | C | D |
Query Conservation |   |
|   |   |
|   |   |   |   |   |   |   |   |
|   |   |
|   |   |
|
|
|   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |
|   |   |
|   | . | . | . | . | . | . | . |   |   |   |   |
|
|   |
|
|
Template Sequence |   |
C | L | K | C | K | Y | L | T | . |
. |
. |
. |
. |
. |
. |
N | D | E | I | C | P | I | C | H |
Template Known Secondary structure |   |
 | T | T | T |
| B |  |  | . | . | . | . | . | . | . | S | S | S | B |
| T | T | T |
|
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
4 | . | . | . | . | . | 10 | . | |
|
|
|
|
|
|
. | . | . | . | . | . | . | . | 20 |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|