Job Description P0A9Q5 Confidence 26.65% Date Thu Jan 5 11:10:59 GMT 2012 Rank 249 Aligned Residues 123 % Identity 16% Template c2jlaD_ PDB info PDB header:transferase Chain: D: PDB Molecule:2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene PDBTitle: crystal structure of e.coli mend, 2-succinyl-5-enolpyruvyl-2 6-hydroxy-3-cyclohexadiene-1-carboxylate synthase - semet3 protein Resolution 2.81 Å

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		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	G	G	S	M	G	S	V	V	G	A	R	F	V	R	A	V	E	Q	A	L	E	D	N	C	P	L	I	C	F	S	A	S	G	G	A	R	M	Q	E	A	L	M	S	L	M	Q	M	A	K	T	S	A	A	L	A	K	M	Q	E	R	G	L	P	Y	I	S	V	L	T	D	P	T	M	G	G	V	S	A	S
Query Conservation
Alig confidence																.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	D	G	L	L	S	T	A	A	G	V	Q	R	A	.	.	.	.	.	.	.	.	S	G	K	P	T	L	A	I	V	G	D	L	S	A	L	Y	D	L	N	A	L	A	L	.	.	.	.	.	.	.	.	.	.	.	.	L	R	Q	V	S	A	P	L	V	L	I	V	V	N	N	N	G	G	Q	I	F	S	L
Template Known Secondary structure		S	S	S												.	.	.	.	.	.	.	.																	T	G	G	G	G	G	G	.	.	.	.	.	.	.	.	.	.	.	.	G	G			S	S										S	S		T
Template Predicted Secondary structure																.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		418	.	420	.	.	.	.	.	.	.	.	.	430	.									.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.													.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.
		210															.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.			.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.
Predicted Secondary structure			.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.
Query SS confidence			.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.
Query Sequence		F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	M	L	G	D	L	N	I	A	E	P	K	A	L	I	G	F	A	.	.	G	P	R	V	I	E	Q	T	V	R	E	K	L	P	P	G	F	Q	R	S	E	F	L	I	E	K	G	A	I	D	M	I	V	R	R	P	E	M	R	L	K	L	A	S	I
Query Conservation			.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.
Alig confidence			.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.																				.	.	.	.	.	.	.	.
Template Conservation																																																								.	.	.	.	.	.	.	.
Template Sequence		L	P	T	P	Q	S	E	R	E	R	F	Y	L	X	P	Q	N	V	H	F	E	H	A	A	A	X	F	E	L	K	Y	H	R	P	Q	N	W	Q	E	L	E	T	A	F	A	D	A	W	R	T	P	T	T	T	.	.	.	.	.	.	.	.	V	I	E	X	V	V	N	D	T	D	G	A	Q	T	L	Q	Q	L
Template Known Secondary structure		T	T			G	G	G					T	T							S							T	T							S	S												T	T	S	S	S			.	.	.	.	.	.	.	.								T	T
Template Predicted Secondary structure																																																								.	.	.	.	.	.	.	.
Template SS confidence
		478	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.									.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.
		274	.	.	.	.	.	280
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	K	L	M	N	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	A	Q	V	S	H	L
Template Known Secondary structure							T
Template Predicted Secondary structure
Template SS confidence
		550	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions