Job Description P0A9Q5 Confidence 29.80% Date Thu Jan 5 11:10:59 GMT 2012 Rank 234 Aligned Residues 81 % Identity 19% Template c2j7pA_ PDB info PDB header:signal recognition Chain: A: PDB Molecule:signal recognition particle protein; PDBTitle: gmppnp-stabilized ng domain complex of the srp gtpases ffh2 and ftsy Resolution 1.97 Å

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		116	.	.	.	120	.	.	.	.	.	.	.																			.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Y	G	M	P	V	V	A	A	A	F	E	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	F	M	G	G	S	M	G	S	V	V	G	A	R	F	V	R	A	V	E	Q	A	L	E	D	N	C	P	L	I	C	F	S	A	S	G	G	A	R	M	Q	E	A	L	M	S	L	M	Q	M
Query Conservation														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.							.
Template Conservation																																																														.							.
Template Sequence		K	G	R	R	P	L	L	V	A	A	D	T	Q	R	P	A	A	R	E	Q	L	R	L	L	G	E	K	V	G	V	P	V	L	E	V	M	D	G	E	S	P	E	S	I	R	R	R	V	E	E	K	A	R	L	E	A	R	D	L	I	.	L	V	D	T	A	G	.	R	L	Q	I	D	E	P	L	M	G	E	L
Template Known Secondary structure		T	T											S	S	T	T													T								T	T																	T	T					.							.			T	T
Template Predicted Secondary structure																																																														.							.
Template SS confidence
		125	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.		.	.	.	.	.	190		.	.	.	.	.	.	.	.	.	200	.	.
		178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	K	T	S	A	A	L	A	K	M	Q	E	R	G	L	P	Y	I	S	V	L	T	D	P	T	M	G
Query Conservation
Alig confidence								.	.	.	.	.	.
Template Conservation								.	.	.	.	.	.
Template Sequence		A	R	L	K	E	V	.	.	.	.	.	.	L	G	P	D	E	V	L	L	V	L	D	A	M	T	G
Template Known Secondary structure								.	.	.	.	.	.				S								T	T
Template Predicted Secondary structure								.	.	.	.	.	.
Template SS confidence
		203	.	.	.	.	.							.	210	.	.	.	.	.	.	.	.	.	220	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions