Job Description P0A9Q5 Confidence 100.00% Date Thu Jan 5 11:10:59 GMT 2012 Rank 30 Aligned Residues 205 % Identity 18% Template c2f9iC_ PDB info PDB header:transferase Chain: C: PDB Molecule:acetyl-coenzyme a carboxylase carboxyl PDBTitle: crystal structure of the carboxyltransferase subunit of acc2 from staphylococcus aureus Resolution 1.98 Å

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		51	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.
Predicted Secondary structure																																																																														.	.	.	.
Query SS confidence																																																																														.	.	.	.
Query Sequence		H	H	M	R	M	T	A	R	N	R	L	H	S	L	L	D	E	G	S	L	V	E	L	G	S	E	L	E	P	K	D	V	L	K	F	R	D	S	K	K	Y	K	D	R	L	A	S	A	Q	K	E	T	G	E	K	D	A	L	V	V	M	K	G	T	L	Y	G	M	P	V	V	A	A	A	F	E	.	.	.	.
Query Conservation																																																																														.	.	.	.
Alig confidence																			.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.
Template Conservation																			.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	Q	E	R	P	T	T	L	D	Y	I	P	Y	I	F	D	S	.	.	F	M	E	L	H	G	D	R	N	F	R	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	P	A	M	I	G	G	I	G	F	L	N	G	R	A	V	T	V	I	G	Q	Q	R	G	K	D
Template Known Secondary structure			T	T	S														.	.								S	S	S			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		T	T									T	T												S	S
Template Predicted Secondary structure																			.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		62	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.			.	80	.	.	.	.	.	.	.	.	.	90																								.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.
						127	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
Predicted Secondary structure		.	.	.	.
Query SS confidence		.	.	.	.
Query Sequence		.	.	.	.	F	A	F	M	G	G	S	M	G	S	V	V	G	A	R	F	V	R	A	V	E	Q	A	L	E	D	N	C	P	L	I	C	F	S	A	S	G	G	A	R	M	Q	E	A	L	M	S	L	M	Q	M	A	K	T	S	A	A	L	A	K	M	Q	E	R	G	L	P	Y	I	S	V	L	T	D	P	T
Query Conservation		.	.	.	.
Alig confidence		.	.	.	.
Template Conservation
Template Sequence		T	K	D	N	I	Y	R	N	F	G	M	A	H	P	E	G	Y	R	K	A	L	R	L	M	K	Q	A	E	K	F	N	R	P	I	F	T	F	I	D	T	K	G	A	Y	P	G	K	A	A	E	E	R	G	Q	S	E	S	I	A	T	N	L	I	E	M	A	S	L	K	V	P	V	I	A	I	V	I	G	E	G
Template Known Secondary structure								T	G	G	G																				T	T										S		S									T	T														T		S	S
Template Predicted Secondary structure
Template SS confidence
		117	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.
		203	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.								.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.
Predicted Secondary structure																																														.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																														.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	G	G	V	S	A	S	F	A	M	L	G	D	L	N	I	A	E	P	K	A	L	I	G	F	A	G	P	R	V	I	E	Q	T	V	R	E	K	L	P	P	G	F	Q	.	.	.	.	.	.	.	R	S	E	F	L	I	E	K	G	A	I	D	M	I	V	R	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																														.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence												.																																		.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation												.
Template Sequence		G	S	G	G	A	L	G	I	G	I	.	A	N	K	V	L	M	L	E	N	S	T	Y	S	V	I	S	P	E	G	A	A	A	L	L	W	K	D	S	N	L	A	K	I	A	A	E	T	M	K	I	T	A	H	D	I	K	Q	L	G	I	I	D	D	V	I	S	E	P	L	G	G	A	H	K	D	I	E	Q	Q
Template Known Secondary structure		B						T	T			.		S						T	T		B		B	S	S										S	S		G	G	G									T		B							T	T	S	S	S							T	T		G	G	G
Template Predicted Secondary structure												.
Template SS confidence
		197	.	.	200	.	.	.	.	.	.		.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.
		263	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	P	E	M	R	L	K	L	A	S	I	L	A	K	L	M	N	L	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	L	A	I	K	S	A	F	V	A	Q	L	D	S	L	E	S	L	S
Template Known Secondary structure															T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		276	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions