Job Description P0A9Q5 Confidence 100.00% Date Thu Jan 5 11:10:59 GMT 2012 Rank 22 Aligned Residues 195 % Identity 17% Template c1od4C_ PDB info PDB header:ligase Chain: C: PDB Molecule:acetyl-coenzyme a carboxylase; PDBTitle: acetyl-coa carboxylase carboxyltransferase domain Resolution 2.7 Å

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		105	.	.	.	.	110	.	.	.	.	.							.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
Predicted Secondary structure													.	.	.	.	.	.																																																					.	.	.	.	.	.	.	.	.	.	.
Query SS confidence													.	.	.	.	.	.																																																					.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	D	A	L	V	V	M	K	G	T	L	.	.	.	.	.	.	Y	G	M	P	V	V	A	A	A	F	E	F	A	F	M	G	G	S	M	G	S	V	V	G	A	R	F	V	R	A	V	E	Q	A	L	E	D	N	C	P	L	I	C	F	S	A	S	G	G	A	R	M	.	.	.	.	.	.	.	.	.	.	.
Query Conservation													.	.	.	.	.	.																																																					.	.	.	.	.	.	.	.	.	.	.
Alig confidence													.	.	.	.	.	.																																																					.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	I	G	X	V	A	F	K	I	T	V	K	T	P	E	Y	P	R	G	R	Q	F	V	V	V	A	N	D	I	T	F	K	I	G	S	F	G	P	Q	E	D	E	F	F	N	K	V	T	E	Y	A	R	K	R	G	I	P	R	I	Y	L	A	A	N	S	G	A	R	I	G	X	A	E	E	I	V	P	L	F	Q
Template Known Secondary structure		S	S	S											S	S		T	T											T	T	S	G	G	G		B																			T											S	B						T	T	T	T	T	S
Template Predicted Secondary structure
Template SS confidence
		1561	.	.	.	.	.	.	.	.	1570	.	.	.	.	.	.	.	.	.	1580	.	.	.	.	.	.	.	.	.	1590	.	.	.	.	.	.	.	.	.	1600	.	.	.	.	.	.	.	.	.	1610	.	.	.	.	.	.	.	.	.	1620	.	.	.	.	.	.	.	.	.	1630	.	.	.	.	.	.	.	.	.	1640
																																																												168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	E	A	L	M	S	L	M	Q	M	A	K	T	S	A	A	L	A	K	M	Q	E
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	A	W	N	D	A	A	N	P	D	K	G	F	Q	Y	L	Y	L	T	S	E	G	X	E	T	L	K	K	F	D	K	E	N	S	V	L	T	E	R	T	V	I	N	G	E	E	R	F	V	I	K	T	I	I	G	S	E	D	G	L	G	V	E	C	L	R	G	S	G	L	I	A	G	A	T	S	R	A	Y	H
Template Known Secondary structure					S	S	T	T		T	T	S																			T		T	T	S									S	S	S											S	S	S		S	S																			T
Template Predicted Secondary structure
Template SS confidence
		1641	.	.	.	.	.	.	.	.	1650	.	.	.	.	.	.	.	.	.	1660	.	.	.	.	.	.	.	.	.	1670	.	.	.	.	.	.	.	.	.	1680	.	.	.	.	.	.	.	.	.	1690	.	.	.	.	.	.	.	.	.	1700	.	.	.	.	.	.	.	.	.	1710	.	.	.	.	.	.	.	.	.	1720
		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.				.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.
Predicted Secondary structure																																																						.	.	.
Query SS confidence																																																						.	.	.
Query Sequence		R	G	L	P	Y	I	S	V	L	T	D	P	T	M	G	G	V	S	A	S	F	A	M	L	G	D	L	N	I	A	E	P	K	A	L	I	G	F	A	G	P	R	V	I	E	Q	T	V	R	E	K	L	.	.	.	P	P	G	F	Q	R	S	E	F	L	I	E	K	G	A	I	D	M	I	V	R	R	P	E	M
Query Conservation																																																						.	.	.
Alig confidence			.																					.																														.	.	.																									.
Template Conservation			.																					.																																																									.
Template Sequence		D	.	I	F	T	I	T	L	V	T	C	R	S	V	G	I	G	A	Y	L	V	R	.	L	G	Q	R	A	I	Q	V	E	G	Q	P	I	I	L	T	G	A	P	A	I	N	K	X	L	G	R	E	V	Y	T	S	N	L	Q	L	G	G	T	Q	I	X	Y	N	N	G	V	S	H	L	T	A	V	D	D	L	.
Template Known Secondary structure		T	.	S								S				T								.		T							T	T					S	S										T	S				S	S	T					S								T	S		S				S	S			.
Template Predicted Secondary structure			.																					.																																																									.
Template SS confidence
		1721		.	.	.	.	.	.	.	.	1730	.	.	.	.	.	.	.	.	.	1740	.		.	.	.	.	.	.	.	.	1750	.	.	.	.	.	.	.	.	.	1760	.	.	.	.	.	.	.	.	.	1770	.	.	.	.	.	.	.	.	.	1780	.	.	.	.	.	.	.	.	.	1790	.	.	.	.	.	.	.
		267	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	L	K	L	A	S	I	L	A	K	L	M	N	L	P	A	P	N	P	E	A	P	R	E	G	V	V	V	P	P	V	P	D	Q	E	P	E
Query Conservation
Alig confidence		.
Template Conservation		.
Template Sequence		.	A	G	V	E	K	I	V	E	W	X	S	Y	V	P	A	K	R	N	X	P	V	P	I	L	E	T	K	D	T	W	D	R	P	V	D	F
Template Known Secondary structure		.										G	G	G	S		S	S	T	T	S								S	S		S	S	S
Template Predicted Secondary structure		.
Template SS confidence
			1798	.	1800	.	.	.	.	.	.	.	.	.	1810	.	.	.	.	.	.	.	.	.	1820	.	.	.	.	.	.	.	.	.	1830	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions