Job Description P42907 Confidence 99.71% Date Thu Jan 5 12:02:05 GMT 2012 Rank 25 Aligned Residues 153 % Identity 16% Template d1vima_ SCOP info SIS domain SIS domain mono-SIS domain Resolution 1.36

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	E	E	E	I	R	H	Q	P	R	A	W	I	R	S	L	T	N	I	D	A	L	R	S	A	L	N	N	F	L	E	P	L	L	R	K	E	N	L	R	I	I	L	T	G	A	G	T	S	A	F	I	G	D	I	I	A	P	W	L	A	S	H	T	G	K	N	F	S	A	V	P	T	T	D	L	V	T	N	P
Query Conservation
Alig confidence																					.	.																	.	.																								.							.	.	.	.	.	.	.
Template Conservation																					.	.																	.	.																								.							.	.	.	.	.	.	.
Template Sequence		L	L	R	F	L	E	V	V	S	E	H	I	K	N	L	R	N	H	I	.	.	D	L	E	T	V	G	E	M	I	K	L	I	D	S	A	R	.	.	S	I	F	V	I	G	A	G	R	S	G	Y	I	A	K	A	F	A	M	R	L	M	H	.	L	G	Y	T	V	Y	.	.	.	.	.	.	.	V	V	G	E
Template Known Secondary structure																					.	.															S	S	.	.							S																	.	T	T					.	.	.	.	.	.	.		T	T	S
Template Predicted Secondary structure																					.	.																	.	.																								.							.	.	.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.			20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.			.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.		.	60	.	.	.	.								.	.	.	.
		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
Predicted Secondary structure																																																																										.	.	.	.	.	.	.	.
Query SS confidence																																																																										.	.	.	.	.	.	.	.
Query Sequence		M	D	Y	L	N	P	A	H	P	L	L	L	I	S	F	G	R	S	G	N	S	P	E	S	V	A	A	V	E	L	A	N	Q	F	V	P	E	C	Y	H	L	P	I	T	C	N	E	A	G	A	L	Y	Q	N	A	I	N	S	D	N	A	F	A	L	L	M	P	A	E	T	H	D	.	.	.	.	.	.	.	.
Query Conservation																																																																										.	.	.	.	.	.	.	.
Alig confidence																																					.	.																					.	.	.	.	.											.	.	.	.	.	.	.	.
Template Conservation																																					.	.																					.	.	.	.	.
Template Sequence		T	V	T	P	R	I	T	D	Q	D	V	L	V	G	I	S	G	S	G	E	T	T	S	V	V	N	I	S	K	K	A	K	D	I	G	.	.	S	K	L	V	A	V	T	G	K	R	D	S	S	L	A	K	M	A	D	V	.	.	.	.	.	V	M	V	V	K	G	K	M	K	Q	E	R	D	E	I	L	S	Q
Template Known Secondary structure		T	T						T	T								S	S	S																T	.	.								S		T	T	S							S		.	.	.	.	.						S	S		T	T
Template Predicted Secondary structure																																					.	.																					.	.	.	.	.
Template SS confidence
		69	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.			.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.						.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	G	F	A	M	T	S	S	I	T	T	M	M	A	S	C	L	A	V	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	A	P	L	G	T	M	F	E	L	T	A	M	I	F	L	D	A	L	V
Template Known Secondary structure			S	G	G	G
Template Predicted Secondary structure
Template SS confidence
		142	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions