 |
| Job Description | P42907 | | Confidence | 39.43% | Date | Thu Jan 5 12:02:05 GMT 2012 |
| Rank | 83 | Aligned Residues | 60 |
| % Identity | 23% | Template | d1reoa1 |
| SCOP info | FAD/NAD(P)-binding domain
| FAD/NAD(P)-binding domain
| FAD-linked reductases, N-terminal domain
|
| Resolution | 2.31 |
|
 |
|   |   |
4 | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . |
| Predicted Secondary structure |   |
|
|
|  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |
| Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence |   |
N | Y | T | P | A | A | A | A | T | G | T | W | T | E | E | E | I | R | H | Q | P | R | A | W | I | R | S | L | T | N | I | D | A | L | R | S | A | L | N | N | F | L | E | P | L | L | R | K | E | N | L | R | I | I | L | T | G | A | G | T | S | A | F | I | G | D | I | I | A | P | W | L | A | S | H | T | G | K | N | F |
| Query Conservation |   |
  |   |   |   |   |   |
|   |   |   |   |   |
|   |
|
|
|   |
|
|
|   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|
|
|   |
|
|
|   |   |
|
|   |   |   |   |   |   |
|   |   |   |   |   |   |   |
|
| Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
| Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |
|   |
|
|
|
|
|
|
|
| . | . | . |   |
|
|
|   |
|
|   |   |
|   |   | . |   |
|   |   |
|
| Template Sequence |   |
D | R | N | P | L | E | E | C | F | R | E | T | D | Y | E | E | F | L | E | I | A | R | N | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
G | L | K | A | T | S | N | P | K | H | V | V | V | V | G | A | G | . |
. |
. |
M | S | G | L | S | A | A | Y | V | L | S | G | . |
A | G | H | Q | V |
| Template Known Secondary structure |   |
|
|
| T | T | G | G | G | G | S |
| T | T |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
| S |
|
|
| S | S |
|
|  |  |  |  |  |
|
| S | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  | . | T | T |
|  |  |
| Template Predicted Secondary structure |   |
|
|
|
|  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
| . | . | . |  |  |  |  |  |  |  |  |  |  |  |  | . |
|
|
|  |  |
| Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
3 | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | |
|
|
. | . | . | . | . | . | . | 50 | . | . | . | . | |
. | . | . | . | . |
|   |
|   |   |
84 | . | . |
| Predicted Secondary structure |   |
 |  |  |
| Query SS confidence |   |
|
|
|
| Query Sequence |   |
S | A | V |
| Query Conservation |   |
  |
|
|
| Alig confidence |   |
|
|
|
| Template Conservation |   |
  |
|
|
| Template Sequence |   |
T | V | L |
| Template Known Secondary structure |   |
 |  |  |
| Template Predicted Secondary structure |   |
 |  |  |
| Template SS confidence |   |
|
|
|
|   |   |
60 | . | . |
|   |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
|   |
|
|
|