|   |
30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | |
|
|
|
|
|
|
|
. | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . |
|
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
Query Sequence |   |
S | L | T | N | I | D | A | L | R | S | A | L | N | N | F | L | E | P | L | L | R | . |
. |
. |
. |
. |
. |
. |
. |
K | E | N | L | R | I | I | L | T | G | A | G | T | S | A | F | I | G | D | I | I | A | P | W | L | A | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
S |
Query Conservation |   |
  |
|   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   | . | . | . | . | . | . | . | . |   |   |   |   |   |
|   |
|
|
|   |
|
|
|   |   |
|
|   |   |   |   |   |   |
|   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
Template Conservation |   |
  |   |   |   |
|   |   |   |   |   |   |   |   |   |
|   |   |   |
|
|
|
|   |   |   |
|   |
|
|
|   |   |   |   |
|
|   |
|
|
|
|
|
|   |
|
|
|   |   |
|   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
V | L | E | D | V | H | G | V | L | K | K | I | E | K | Y | S | D | D | I | R | N | G | V | I | K | T | C | K | N | T | K | F | K | N | V | I | C | I | G | I | G | G | S | Y | L | G | T | E | F | V | Y | E | A | M | K | Y | Y | Y | Y | N | M | E | L | N | K | N | E | K | D | Q | V | N | N | F | N | N | N | Y | D | Q |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | S | S |
|
| T | T | S | S |
|
|
|  |  |  |  |  |
|
| G | G | G | T |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | S |
|
|
| T | T |
|
|
|
| T | T |
|
|
| S | S |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
117 | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . |
  |
  |   |
78 | . | 80 | . | . | . | . | . | . | . | |
|
|
. | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | |
|
|
|
|
|
|
|
|
. | . | . | . | 140 | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |
|
|
|  |  |  |  |
| . | . | . |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  | . | . | . | . | . | . | . | . | . |  |  |  |  |  |
|
|
|
|  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
H | T | G | K | N | F | S | A | V | P | . |
. |
. |
T | T | D | L | V | T | N | P | M | D | Y | L | N | P | A | H | P | L | L | L | I | S | F | G | R | S | G | N | S | P | E | S | V | A | A | V | E | L | A | N | Q | F | V | P | E | C | Y | H | . |
. |
. |
. |
. |
. |
. |
. |
. |
L | P | I | T | C | N | E | A | G | A |
Query Conservation |   |
  |   |   |   |   |
|   |
|
|   | . | . | . |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|   |
|
|
|
|
|
|
|   |
|
|
|   |
|
|   |   |
|
|   |   |
|   |   |   |   |
| . | . | . | . | . | . | . | . | . |
|   |
|
|
|   |   |   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . |
|
|
|
| . |
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |
|   |
|   |
|
|
|
|
|   |   |   | . | . |   |   |   |
|   |   |
|
|   |   |   |
|
|   |
|
|
|
|
|
|
|
|
|   |
|
|   |   |
|   |   |   |   |
|   |   |
|   |   |   |   |
|   |   |   |   |   |   |
|
|   |
|
|
|
| . |   |   |   |   |   |
Template Sequence |   |
D | N | V | F | N | V | R | F | L | A | N | V | D | P | N | D | V | . |
. |
N | R | A | I | Q | N | L | D | Q | Y | D | T | L | V | I | I | I | S | K | T | F | T | T | A | E | T | M | L | N | A | R | S | I | K | K | W | L | S | L | K | I | K | D | D | E | N | L | S | K | H | M | V | A | V | S | . |
T | N | L | K | L |
Template Known Secondary structure |   |
T | T |
|
|  |  |  |  |  |
|
| S | S |  |  |  |  | . | . |  |  |  |  | T | T |
|
| G | G | G |  |  |  |  |  |  |
| S | S | S |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
| S |  |  |  |  |  | T | T |  |  |  |  |
| . | S |
|  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  | . | . |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|  |  |  |  |  |  | . |
|
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
197 | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | |
|
. | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | |
. | 270 | . | . | . |
  |
  |   |
146 | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|
|
|  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | Y | Q | N | A | I | N | S | D | N | A | F | A | L | L | M | P | A | E | T | H | D | R | G | F | A | M | T | S | S | I | T | T | M | M | A | S | C |
Query Conservation |   |
|
|   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|
|
|   |
|
|
|   |
|   |   |
|
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |
|
|   |   |   |   |   |
|   |   |
|
|   |
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|   |
|
|
|   |
Template Sequence |   |
T | D | E | F | G | I | S | R | D | N | V | F | E | F | W | D | W | V | G | G | R | F | . |
S | V | T | S | S | V | G | I | L | P | L | S | I | A | F |
Template Known Secondary structure |   |
 |  |  |  | T |
|
| G | G | G | B |
|
|
|
| T | T | S |
| G | G | G | . |
| T | T | T |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |
|
|
|
|
|
|
|  |  |  |
|
|
|
|
|
|
|
|  | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
274 | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | |
. | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 |
  |