Job Description P42907 Confidence 99.75% Date Thu Jan 5 12:02:05 GMT 2012 Rank 24 Aligned Residues 159 % Identity 18% Template c3fxaA_ PDB info PDB header:sugar binding protein Chain: A: PDB Molecule:sis domain protein; PDBTitle: crystal structure of a putative sugar-phosphate isomerase2 (lmof2365_0531) from listeria monocytogenes str. 4b f2365 at 1.60 a3 resolution Resolution 1.60 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	E	I	R	H	Q	P	R	A	W	I	R	S	L	T	N	I	D	A	L	R	S	A	L	N	N	F	L	E	P	L	L	R	K	E	N	L	R	I	I	L	T	G	A	G	T	S	A	F	I	G	D	I	I	A	P	W	L	A	S	H	T	G	K	N	F	S	A	V	P	T	T	D	L	V	T	N	P	M	D
Query Conservation
Alig confidence																			.	.																	.																									.
Template Conservation																			.	.																	.																									.
Template Sequence		Q	T	W	Q	E	E	A	N	A	I	S	R	L	P	E	V	T	.	.	S	E	E	A	L	V	K	T	V	E	K	I	A	E	C	T	.	G	K	I	V	V	A	G	C	G	T	S	G	V	A	A	K	K	L	V	H	S	F	N	C	.	I	E	R	P	A	V	F	L	T	P	S	D	A	V	H	G	T	L	G
Template Known Secondary structure													T					S	.	.																S	.	S								T																.	T	T												T	T	T	G	G	G
Template Predicted Secondary structure																			.	.																	.																									.
Template SS confidence
		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.			.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.		.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.		.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	L	N	P	A	H	P	L	L	L	I	S	F	G	R	S	G	N	S	P	E	S	V	A	A	V	E	L	A	N	Q	F	V	P	E	C	Y	H	L	P	I	T	C	N	E	A	G	A	L	Y	Q	N	A	I	N	S	D	N	A	F	A	L	L	M	P	A	E	T	H	D	R	G	F	A	M	T	S	S	I	T
Query Conservation
Alig confidence								.	.																										.	.																							.	.	.
Template Conservation								.	.																										.	.																							.	.	.
Template Sequence		V	L	Q	K	E	D	.	.	I	L	I	L	I	S	K	G	G	N	T	G	E	L	L	N	L	I	P	A	C	K	T	K	G	.	.	S	T	L	I	G	V	T	E	N	P	D	S	V	I	A	K	E	A	D	I	F	F	.	.	.	P	V	S	V	S	K	E	P	D	P	F	N	X	L	A	T	A	S	T	X
Template Known Secondary structure		G			T	T		.	.							S	S	S							T	T								T	.	.								S		T	T	S							S				.	.	.					S				S	T	T	S		S
Template Predicted Secondary structure								.	.																										.	.																							.	.	.
Template SS confidence
		88	.	90	.	.	.			.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.			.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140				.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		178	.	180	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	M	M	A	S	C	L	A	V	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	V	I	A	S	F	D	A	V	I
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		161	.	.	.	.	.	.	.	.	170

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions