Job Description P42907 Confidence 100.00% Date Thu Jan 5 12:02:05 GMT 2012 Rank 9 Aligned Residues 328 % Identity 18% Template c3fj1A_ PDB info PDB header:isomerase Chain: A: PDB Molecule:putative phosphosugar isomerase; PDBTitle: crystal structure of putative phosphosugar isomerase (yp_167080.1)2 from silicibacter pomeroyi dss-3 at 1.75 a resolution Resolution 1.75 Å

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		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A	A	T	G	T	W	T	E	E	E	I	R	H	Q	P	R	A	W	I	R	S	L	T	N	I	D	A	L	R	S	A	L	N	N	F	L	E	P	L	L	R	K	E	N	L	R	I	I	L	T	G	A	G	T	S	A	F	I	G	D	I	I	A	P	W	L	A	S	H	T	G	K	N	F	S	A	V	P	T
Query Conservation
Alig confidence																										.	.	.
Template Conservation																										.	.	.
Template Sequence		X	T	Q	H	I	T	R	X	R	R	E	I	D	E	I	P	E	A	V	Q	R	L	L	D	.	.	.	H	G	A	Q	D	V	A	R	V	A	A	V	L	R	L	R	D	P	S	F	V	A	T	V	A	R	G	S	S	D	H	V	C	T	Y	L	S	Y	A	A	E	L	L	L	G	L	P	V	A	S	L	G	P
Template Known Secondary structure			S																							.	.	.																			S								T																										T
Template Predicted Secondary structure																										.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.				.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	D	L	V	T	N	P	M	D	Y	L	N	P	A	H	P	L	L	L	I	S	F	G	R	S	G	N	S	P	E	S	V	A	A	V	E	L	A	N	Q	F	V	P	E	C	Y	H	L	P	I	T	C	N	E	A	G	A	L	Y	Q	N	A	I	N	S	D	N	A	F	A	L	L	M	P	A	E	T	H	D	R
Query Conservation
Alig confidence							.	.																																				.	.																				.	.	.	.	.	.
Template Conservation							.	.																																				.	.																				.	.	.	.	.	.
Template Sequence		S	V	A	S	V	.	.	Y	D	A	R	L	R	L	D	R	A	L	C	L	A	V	S	Q	S	G	K	S	P	D	I	V	A	X	T	R	N	A	G	R	D	G	.	.	A	L	C	V	A	L	T	N	D	A	A	S	P	L	A	G	V	S	A	.	.	.	.	.	.	H	T	I	D	I	H	A	G	P	E	L
Template Known Secondary structure						T	.	.	T							T	T								S	S	S															T	T	.	.								S		T	T	S					T	S	S	.	.	.	.	.	.
Template Predicted Secondary structure							.	.																																				.	.																				.	.	.	.	.	.
Template SS confidence
		78	.	80	.	.			.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.			.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.							.	.	.	140	.	.	.	.	.	.	.
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.				.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.
Predicted Secondary structure																				.	.	.
Query SS confidence																				.	.	.
Query Sequence		G	F	A	M	T	S	S	I	T	T	M	M	A	S	C	L	A	V	.	.	.	F	A	P	E	T	I	N	S	Q	T	F	R	D	V	A	D	R	C	Q	A	I	L	T	S	L	G	D	F	S	E	G	V	F	G	Y	A	P	W	K	R	I	V	Y	L	G	S	G	G	L	Q	G	A	A	R	E	S	A	L	K
Query Conservation																				.	.	.
Alig confidence																				.	.	.																												.	.
Template Conservation																																																		.	.
Template Sequence		S	V	A	A	T	K	T	F	V	T	S	A	V	A	G	L	X	L	L	A	D	W	A	E	D	D	G	L	R	A	A	L	G	N	L	P	E	T	L	A	A	A	S	R	I	D	W	P	.	.	E	X	R	V	A	I	G	A	R	P	S	L	F	T	L	G	R	G	T	S	L	A	V	S	N	E	A	A	L	K
Template Known Secondary structure		S	T	T																					T										T										T					.	.									S									G	G	G
Template Predicted Secondary structure																																																		.	.
Template SS confidence
		148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.			.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
		246	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	L	E	L	T	A	G	K	L	A	A	F	Y	D	S	P	T	G	F	R	H	G	P	K	S	L	V	D	D	E	T	L	V	V	V	F	V	S	S	H	P	Y	T	R	Q	Y	D	L	D	L	L	A	E	L	R	R	D	N	Q	A	M	R	V	I	A	I	A	A	E	S	S	D	I	V	A	A	G	P	H	I
Query Conservation
Alig confidence							.	.																																			.																		.	.									.	.	.	.	.	.
Template Conservation							.	.																																			.																		.	.									.	.	.	.	.	.
Template Sequence		F	K	E	T	C	.	.	Q	L	H	A	E	S	Y	S	S	A	E	V	L	H	G	P	V	S	I	V	E	E	G	F	P	V	L	G	F	A	A	G	D	A	.	A	E	A	P	L	A	E	I	A	D	Q	I	A	A	K	G	A	.	.	T	V	F	A	T	T	G	R	.	.	.	.	.	.	V	T	R	A	R
Template Known Secondary structure							.	.									T	T	T	G	G	G	S	S	S						T									S	S	T	.	T														T	T		.	.					S	S	T	T	.	.	.	.	.	.		S	S	S
Template Predicted Secondary structure							.	.																																			.																		.	.									.	.	.	.	.	.
Template SS confidence
		226	.	.	.	230			.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.		.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.			.	.	.	.	.	.	.	.							290	.	.	.	.
		326	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	L	P	P	S	R	H	F	I	D	V	E	Q	A	F	C	F	L	M	Y	A	Q	T	F	A	L	M	Q	S	L	H	M	G	N	T	P	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	L	E	H	V	R	S	G	H	A	L	T	D	P	L	S	L	I	V	S	F	Y	S	X	V	E	A	F	A	S	E	R	G	I	D	P	D
Template Known Secondary structure									S	S	T	T	T																				T	T
Template Predicted Secondary structure
Template SS confidence
		295	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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