|   |
31 | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | |
|
|
|
|
|
|
|
. | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | |
|
|
|
|
. | . | 90 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . |
|
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
| . | . | . | . | . |  |  |  |  |  |  |
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | T | N | I | D | A | L | R | S | A | L | N | N | F | L | E | P | L | L | R | . |
. |
. |
. |
. |
. |
. |
. |
K | E | N | L | R | I | I | L | T | G | A | G | T | S | A | F | I | G | D | I | I | A | P | W | L | A | S | H | T | G | K | N | F | S | A | V | P | . |
. |
. |
. |
. |
T | T | D | L | V | T | N | P | M | D |
Query Conservation |   |
|   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   | . | . | . | . | . | . | . | . |   |   |   |   |   |
|   |
|
|
|   |
|
|
|   |   |
|
|   |   |   |   |   |   |
|   |   |   |   |   |   |   |
|   |
|
|   | . | . | . | . | . |   |
|
|   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|   |   |   |   |   |   |
|   |   |
|   |   |   |
|   |   |
|   |   |   |
|   |
|
|
|   |   |   |   |
|
|   |
|
|
|
|
|
|   |
|
|
|   |   |
|   |   |
|
|   |   |   |   |   |   |   |   |   |
|   |
|
|   |
|
|
|
|   |   |   |   |   |   |
|   |   |
Template Sequence |   |
M | P | A | V | N | K | V | L | D | Q | M | R | S | F | S | E | K | V | R | T | G | E | W | K | G | H | T | G | K | A | I | R | H | V | V | N | I | G | I | G | G | S | D | L | G | P | V | M | A | T | E | A | L | K | P | F | S | Q | R | D | L | S | L | H | F | V | S | N | V | D | G | T | H | I | A | E | V | L | K | S |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
| S | B |
| T | T | S |
| B |
|
|  |  |  |  |  |
|
| G | G | G | T |  |  |  |  |  |  |  |  |  | T | G | G | G | S |
| T | T | S |  |  |  |  |  |
|
| S | S |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
167 | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . |
  |
  |   |
98 | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Y | L | N | P | A | H | P | L | L | L | I | S | F | G | R | S | G | N | S | P | E | S | V | A | A | V | E | L | A | N | Q | F | V | P | E | C | Y | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
H | L | P | I | T | C | N | E | A | G | A | L | Y | Q | N | A | I | N | S | D | N | A | F | A | L |
Query Conservation |   |
  |   |   |   |   |   |   |   |
|
|
|   |
|
|
|
|
|
|
|   |
|
|
|   |
|
|   |   |
|
|   |   |
|   |   |   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|   |
|
|
|   |   |   |
|   |
|
|   |   |
|
|   |   |   |   |   |   |   |   |
Alig confidence |   |
. | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
. | . |
|
|
|   |   |
|
|   |
|
|
|
|
|
|
|
|
|   |
|
|
|   |
|
|   |   |   |
|   | . | . | . | . |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|
|
|
| . |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |
|   |   |
Template Sequence |   |
. |
. |
I | D | I | E | A | T | L | F | I | V | A | S | K | T | F | T | T | Q | E | T | I | T | N | A | L | S | A | R | R | . |
. |
. |
. |
A | L | L | D | Y | L | R | S | R | G | I | D | E | K | G | S | V | A | K | H | F | V | A | L | S | . |
T | N | N | Q | K | V | K | E | F | G | I | D | E | E | N | M | F | Q | F |
Template Known Secondary structure |   |
. | . |
|
| G | G | G |  |  |  |  |  |  |
| S | S | S |
|
|  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . |  |  |  |  |  |  |  |  | T | T |
|
|
| T | T |
|  |  |  |  |  |  |  |  |  | . | S |
|  |  |  |  |  |  |  | T |
|
| G | G | G |  |  |  |
|
Template Predicted Secondary structure |   |
. | . |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  | . |
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
|
|
247 | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | |
|
|
|
. | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | |
. | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . |
  |
  |   |
160 | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
Query Sequence |   |
L | M | P | A | E | T | H |
Query Conservation |   |
  |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |
|
|
|
|
Template Sequence |   |
W | D | W | V | G | G | R |
Template Known Secondary structure |   |
| T | T | S |
| G | G |
Template Predicted Secondary structure |   |
|
|
|
|
|
|  |
Template SS confidence |   |
|
|
|
|
|
|
|
  |   |
320 | . | . | . | . | . | . |
  |