Job Description P42907 Confidence 100.00% Date Thu Jan 5 12:02:05 GMT 2012 Rank 11 Aligned Residues 321 % Identity 23% Template c2decA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:325aa long hypothetical protein; PDBTitle: crystal structure of the ph0510 protein from pyrococcus horikoshii ot3 Resolution 1.70 Å

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		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	E	E	E	I	R	H	Q	P	R	A	W	I	R	S	L	T	N	I	D	A	L	R	S	A	L	N	N	F	L	E	P	L	L	R	K	E	N	L	R	I	I	L	T	G	A	G	T	S	A	F	I	G	D	I	I	A	P	W	L	A	S	H	T	G	K	N	F	S	A	V	P	T	T	D	L	V	T	N	P
Query Conservation
Alig confidence																												.	.	.	.	.	.	.	.	.																																		.
Template Conservation																												.	.	.	.	.	.	.	.	.																																		.
Template Sequence		T	L	I	E	I	K	Q	T	P	D	G	I	I	K	A	D	K	V	F	N	K	V	K	D	K	I	.	.	.	.	.	.	.	.	.	S	L	P	N	R	I	L	Y	L	G	C	G	S	S	H	F	L	S	K	L	L	A	M	V	T	N	M	H	G	G	L	G	I	.	A	L	P	C	S	E	F	L	Y	S	K
Template Known Secondary structure							T	T																T	T	T		.	.	.	.	.	.	.	.	.				S							S	T																T	T	S				.											G
Template Predicted Secondary structure																												.	.	.	.	.	.	.	.	.																																		.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.										.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.		.	.	.	.	.	.	.	.	70	.	.
		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	D	Y	L	N	P	A	H	P	L	L	L	I	S	F	G	R	S	G	N	S	P	E	S	V	A	A	V	E	L	A	N	Q	F	V	P	E	C	Y	H	L	P	I	T	C	N	E	A	G	A	L	Y	Q	N	A	I	N	S	D	N	A	F	A	L	L	M	P	A	E	T	H	D	R	G	F	A	M	T	S	S
Query Conservation
Alig confidence						.																											.	.	.		.	.								.												.	.	.	.	.	.									.
Template Conservation						.																											.	.	.		.	.								.												.	.	.	.	.	.									.
Template Sequence		E	T	Y	P	.	I	G	E	V	E	L	A	V	G	I	S	R	S	G	E	T	T	E	I	L	L	A	L	E	K	I	.	.	.	N	.	.	V	K	K	L	G	I	T	.	T	R	E	S	S	L	T	R	M	C	D	.	.	.	.	.	.	Y	S	L	V	V	P	A	I	.	E	E	S	V	V	M	T	H	S
Template Known Secondary structure		G	G	S		.			S		S							S	S	S											T		.	.	.		.	.	S							.	S	S	S	S						S	S	.	.	.	.	.	.									.			S	S	S
Template Predicted Secondary structure						.																											.	.	.		.	.								.												.	.	.	.	.	.									.
Template SS confidence
		73	.	.	.		.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.				.			.	.	.	.	.	.	110		.	.	.	.	.	.	.	.	.	120	.							.	.	.	.	.	.	.	.		130	.	.	.	.	.	.	.	.
		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.		.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.
Predicted Secondary structure																			.
Query SS confidence																			.
Query Sequence		I	T	T	M	M	A	S	C	L	A	V	F	A	P	E	T	I	.	N	S	Q	T	F	R	D	V	A	D	R	C	Q	A	I	L	T	S	L	G	D	F	S	E	G	V	F	G	Y	A	P	W	K	R	I	V	Y	L	G	S	G	G	L	Q	G	A	A	R	E	S	A	L	K	V	L	E	L	T	A	G	K	L
Query Conservation																			.
Alig confidence																			.																														.																													.	.
Template Conservation																																																	.																													.	.
Template Sequence		F	T	S	F	Y	F	A	Y	L	Q	L	L	R	Y	S	Y	G	L	P	P	L	N	A	G	E	I	S	K	A	T	E	K	S	L	E	Y	E	R	Y	I	R	E	I	V	E	S	F	.	D	F	Q	N	I	I	F	L	G	S	G	L	L	Y	P	V	A	L	E	A	S	L	K	M	K	E	M	S	.	.	I	F
Template Known Secondary structure																	T	T																		T	T												.			S								T	T																	.	.
Template Predicted Secondary structure																																																	.																													.	.
Template SS confidence
		139	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.		.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.			.	.
		255	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A	F	Y	D	S	P	T	G	F	R	H	G	P	K	S	L	V	D	D	E	T	L	V	V	V	F	V	S	S	H	P	Y	T	R	Q	Y	D	L	D	L	L	A	E	L	R	R	D	N	Q	A	M	R	V	I	A	I	A	A	E	S	S	D	I	V	A	A	G	P	H	I	I	L	P	P	S	R	H	F	I
Query Conservation
Alig confidence																																	.	.	.																	.	.																.	.	.	.
Template Conservation																																	.	.	.																	.	.																.	.	.	.
Template Sequence		W	S	E	A	Y	P	T	F	E	V	R	H	G	F	K	A	I	A	D	E	K	T	L	V	V	L	M	V	E	E	P	.	.	.	F	E	W	H	E	K	L	V	K	E	F	K	N	Q	G	A	.	.	K	V	L	V	I	S	N	S	P	Q	D	L	G	Q	D	.	.	.	.	Y	S	I	E	L	P	R	L	S
Template Known Secondary structure								G	G	G	G	G	T	T	G	G	G	G		S	T	T								S	S		.	.	.														T	T		.	.							S						S		S	.	.	.	.
Template Predicted Secondary structure																																	.	.	.																	.	.																.	.	.	.
Template SS confidence
		216	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.				.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.			.	.	.	.	.	.	.	270	.	.	.	.	.	.	.					.	.	280	.	.	.	.	.	.
		335	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	V	E	Q	A	F	C	F	L	M	Y	A	Q	T	F	A	L	M	Q	S	L	H	M	G	N	T	P	D	T	P	S	A	S	G	T	V	N	R	V	V	Q
Query Conservation
Alig confidence																																	.	.	.
Template Conservation																																	.	.	.
Template Sequence		K	D	A	N	P	I	P	Y	L	P	I	V	Q	L	L	S	Y	Y	K	A	V	S	R	G	L	N	P	D	N	P	R	.	.	.	F	L	D	K	V	V	R
Template Known Secondary structure		T	T	T	T	T	T	T																T	T			T	T	S		T	.	.	.	T			S	S
Template Predicted Secondary structure																																	.	.	.
Template SS confidence
		287	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.				.	.	320	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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