Job Description P42907 Confidence 100.00% Date Thu Jan 5 12:02:05 GMT 2012 Rank 13 Aligned Residues 327 % Identity 15% Template c2a3nA_ PDB info PDB header:sugar binding protein Chain: A: PDB Molecule:putative glucosamine-fructose-6-phosphate aminotransferase; PDBTitle: crystal structure of a putative glucosamine-fructose-6-phosphate2 aminotransferase (stm4540.s) from salmonella typhimurium lt2 at 1.353 a resolution Resolution 1.23 Å

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		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
Predicted Secondary structure
Query SS confidence
Query Sequence		R	H	Q	P	R	A	W	I	R	S	L	T	N	I	D	A	L	R	S	A	L	N	N	F	L	E	P	L	L	R	K	E	N	L	R	I	I	L	T	G	A	G	T	S	A	F	I	G	D	I	I	A	P	W	L	A	S	H	T	G	K	N	F	S	A	V	P	T	T	D	L	V	T	N	P	M	D	Y	L	N
Query Conservation
Alig confidence																.
Template Conservation																.
Template Sequence		F	N	Q	D	E	Y	L	T	S	A	R	E	I	I	.	A	A	R	Q	K	A	E	Q	V	A	D	E	I	Y	Q	A	G	F	S	S	L	F	F	A	S	V	G	G	S	L	A	P	X	X	A	I	N	E	F	A	K	E	L	T	T	L	P	V	Y	V	E	Q	A	A	E	L	I	H	K	G	N	K	R	L	N
Template Known Secondary structure																.	T	T																	S								G	G	G																	S																T	T
Template Predicted Secondary structure																.
Template SS confidence
		11	.	.	.	.	.	.	.	.	20	.	.	.	.		.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
Predicted Secondary structure
Query SS confidence
Query Sequence		P	A	H	P	L	L	L	I	S	F	G	R	S	G	N	S	P	E	S	V	A	A	V	E	L	A	N	Q	F	V	P	E	C	Y	H	L	P	I	T	C	N	E	A	G	A	L	Y	Q	N	A	I	N	S	D	N	A	F	A	L	L	M	P	A	E	T	H	D	R	G	F	A	M	T	S	S	I	T	T	M	M
Query Conservation
Alig confidence					.	.																										.	.																				.	.	.	.	.	.
Template Conservation					.	.																										.	.																				.	.	.	.	.	.
Template Sequence		K	D	S	.	.	V	V	I	T	L	S	K	S	G	D	T	K	E	S	V	A	I	A	E	W	C	K	A	Q	G	.	.	I	R	V	V	A	I	T	K	N	A	D	S	P	L	A	Q	A	A	T	.	.	.	.	.	.	W	H	I	P	X	R	H	K	N	G	V	E	Y	E	Y	X	L	L	Y	W	L	F	F
Template Known Secondary structure		T	T		.	.							S	S	S															T	T	.	.								S		T	T	S					T		S	.	.	.	.	.	.								S	S
Template Predicted Secondary structure					.	.																										.	.																				.	.	.	.	.	.
Template SS confidence
		90	.	.			.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.			.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.							.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
		181	.	.	.	.	.	.			.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.		.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.
Predicted Secondary structure									.	.																															.																							.
Query SS confidence									.	.																															.																							.
Query Sequence		A	S	C	L	A	V	F	.	.	A	P	E	T	I	N	S	Q	T	F	R	D	V	A	D	R	C	Q	A	I	L	T	S	L	G	D	F	S	E	G	.	V	F	G	Y	A	P	W	K	R	I	V	Y	L	G	S	G	G	L	Q	G	A	A	.	R	E	S	A	L	K	V	L	E	L	T	A	G	K	L	A	A
Query Conservation									.	.																															.																							.
Alig confidence									.	.																															.																							.												.	.
Template Conservation																																																																												.	.
Template Sequence		R	V	L	S	R	N	N	E	F	A	S	Y	D	R	F	A	S	Q	L	E	I	L	P	A	N	L	L	K	A	K	Q	K	F	D	P	Q	A	D	A	I	A	S	R	Y	H	N	S	D	Y	X	X	W	V	G	G	A	E	X	W	G	E	V	Y	L	F	S	X	C	I	L	E	E	X	Q	.	.	W	K	R	T
Template Known Secondary structure							T	T	S		T	T								G	G	G																								T	T		S								G	G	G											T						.	.
Template Predicted Secondary structure																																																																												.	.
Template SS confidence
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.			.	.	.	.
		257	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	Y	D	S	P	T	G	F	R	H	G	P	K	S	L	V	D	D	E	T	L	V	V	V	F	V	S	S	H	P	Y	T	R	Q	Y	D	L	D	L	L	A	E	L	R	R	D	N	Q	A	M	R	V	I	A	I	A	A	E	S	S	D	I	V	A	A	G	P	H	I	I	L	P	P	S	R	H	F	I	D	V
Query Conservation
Alig confidence																																.																																.	.	.	.	.	.	.	.	.	.
Template Conservation																																.																																.	.	.	.	.	.	.	.	.	.
Template Sequence		R	P	V	S	S	A	E	F	F	H	G	A	L	E	L	L	E	K	D	V	P	L	I	L	V	K	G	E	G	K	.	C	R	A	L	D	E	R	V	E	R	F	A	S	K	I	T	D	N	L	V	V	I	D	P	K	A	Y	A	L	D	G	.	.	.	.	.	.	.	.	.	.	I	D	D	E	F	R	W	I
Template Known Secondary structure										T	T	T	G	G	G	G			T	T									S	S	T	.	T																S							G	G	G	S			T	T	.	.	.	.	.	.	.	.	.	.	S		G	G	G
Template Predicted Secondary structure																																.																																.	.	.	.	.	.	.	.	.	.
Template SS confidence
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.		.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.											.	300	.	.	.	.	.	.
		337	.	.		340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.
Predicted Secondary structure					.
Query SS confidence					.
Query Sequence		E	Q	A	.	F	C	F	L	M	Y	A	Q	T	F	A	L	M	Q	S	L	H	M	G	N	T	P	D	T	P	S	A	S	G	T	V	N
Query Conservation					.
Alig confidence					.
Template Conservation
Template Sequence		X	A	P	C	V	V	S	T	L	L	V	D	R	L	A	A	H	F	E	K	Y	T	G	H	S	L	D	I	R	R	Y	Y	R	Q	F	D
Template Known Secondary structure												T	T														T	T			S	S	T	T	T	S
Template Predicted Secondary structure
Template SS confidence
		307	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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