|   |
55 | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | |
. | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | |
|
|
|
|
|
|
|
|
|
|
|
|
Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |
| . | . | . | . | . | . | . | . | . | . | . | . | . |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
Query Sequence |   |
V | V | V | L | F | R | H | A | E | R | C | D | R | S | T | N | Q | C | L | S | . |
D | K | T | G | I | T | V | K | G | T | Q | D | A | R | E | L | G | N | A | F | S | A | D | I | P | D | F | D | L | Y | S | S | N | T | V | R | T | I | Q | S | A | T | W | F | S | A | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
Query Conservation |   |
  |
|   |
|
|
|
|
|
|   |   |
|   |   |   |   |   |   |   |   | . |   |   |   |   |
|
|   |   |
|   |   |   |
|   |   |
|
|   |   |
|   |   |   |   |   |   |   |   |
|   |
|
|
|   |   |
|
|   |
|
|
|   |   |   |   |   | . | . | . | . | . | . | . | . | . | . | . | . | . |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . |
Template Conservation |   |
  |
|   |
|
|
|
|
|
|   |   |   |
|   |   |   |   |   |   |
|   |   |
|   |   |
|
|   |   |
|   |   |
|
|   |   |
|   |   |   | . | . | . | . |   |   |   |   |   |
|   |
|
|
|   |   |
|
|   |
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
E | L | W | L | V | R | H | G | E | T | L | W | N | R | E | G | R | L | L | G | W | T | D | L | P | L | T | A | E | G | E | A | Q | A | R | R | L | K | G | A | . |
. |
. |
. |
L | P | S | L | P | A | F | S | S | D | L | L | R | A | R | R | T | A | E | L | A | G | F | S | P | R | L | Y | P | E | L | R | E | I | H | F |
Template Known Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|  |  |  |  |  | T | B |
|
| S | S |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  | T | T | T | . | . | . | . | S |
| S |
|
|  |  |  |
| S | S |  |  |  |  |  |  |  |  |  | T | T |
|
|
|  |  |
| G | G | G | S |
|
|
|
|
Template Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
| . | . | . | . |
|
|
|
|  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
2 | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | |
|
|
|
. | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . |
  |
  |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
121 | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
. | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
Query SS confidence |   |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
G | K | K | L | T | V | D | K | R | L | L | Q | C | G | N | E | I | Y | S | A | I | K | D | L | Q | S | K | A | P | D | K | N | I | V | I | F | T | H | N | H | C | L | T | Y | I | A | K | D | K | R | D | A | T | F | K | P | D |
Query Conservation |   |
. | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |
|   |   |
|
|   |   |   |   |   |
|
|
|
|
|
|
|
|   |   |   |
|   |   |
|   |   |   |
|   |
|   |   |   |   |
|   |
Alig confidence |   |
. | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |
|   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |   |   |   |   |
|   |   |   |   |   |   |   |   | . | . | . | . | . |   |   |   |
|
|
|
|
|
|
|   |   |
|   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |
Template Sequence |   |
G | A | L | E | G | A | L | W | E | T | L | D | P | R | Y | K | E | A | L | L | R | F | Q | G | F | H | P | P | G | G | E | S | L | S | A | F | Q | E | R | V | F | R | F | L | E | G | L | . |
. |
. |
. |
. |
K | A | P | A | V | L | F | T | H | G | G | V | V | R | A | V | L | R | A | L | G | E | D | G | L | V | P | P |
Template Known Secondary structure |   |
G | G | G | T | T |
| B | G | G | G | S |
|  |  |  |  |  |  |  |  | T | T |
| S |
|
|
| T | T | S |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| . | . | . | . | . |
| S |
|  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  | T | T | S |
|
|
|
|
| T |
Template Predicted Secondary structure |   |
 |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| . | . | . | . | . |
|
|
|  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
78 | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | |
|
|
|
|
. | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . |
  |
  |   |
178 | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . |
Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |
|
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Y | L | D | G | L | V | M | H | V | E | K | G | K | V | Y | L |
Query Conservation |   |
|   |   |   |
|
|   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
. |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |
Template Sequence |   |
. |
G | S | A | V | A | V | D | W | P | R | R | V | L | V | R |
Template Known Secondary structure |   |
. | T |
|  |  |  |  |  | T | T | T |  |  |  |  |  |
Template Predicted Secondary structure |   |
. |
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
|
153 | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . |
  |