Job Description P45565 Confidence 46.19% Date Thu Jan 5 12:03:18 GMT 2012 Rank 46 Aligned Residues 73 % Identity 16% Template c2c4kD_ PDB info PDB header:regulatory protein Chain: D: PDB Molecule:phosphoribosyl pyrophosphate synthetase- PDBTitle: crystal structure of human phosphoribosylpyrophosphate2 synthetase-associated protein 39 (pap39) Resolution 2.65 Å

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		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.			.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120																					.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.
Predicted Secondary structure																		.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																		.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	R	E	L	G	N	A	F	S	A	D	I	P	D	F	D	.	.	L	Y	S	S	N	T	V	R	T	I	Q	S	A	T	W	F	S	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	K	K	L	T	V	D	K	R	L	L	Q	C	G	N	E	I	Y	S	A	I	K	D	L
Query Conservation																		.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																		.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	P	F	L	L	Q	Y	I	Q	E	E	I	P	N	Y	R	N	A	V	I	V	A	K	S	P	D	A	A	K	R	A	Q	S	Y	A	E	R	L	R	L	G	L	A	V	I	H	P	P	I	T	V	V	G	D	V	G	G	R	I	A	I	I	V	D	D	I	I	D	D	V	E	S	F	V	A	A	A	E	I	L
Template Known Secondary structure													S	T	T	G	G	G						S	S	G	G	G												T														S			T	T								S			S	S	T
Template Predicted Secondary structure
Template SS confidence
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
		145	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	S	K	A	P	D	K	N	I	V	I	F	T	H	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	E	R	G	A	Y	K	I	Y	V	M	A	T	H	G
Template Known Secondary structure			T	T	T
Template Predicted Secondary structure
Template SS confidence
		273	.	.	.	.	.	.	280	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions