Job Description P52627 Confidence 6.11% Date Thu Jan 5 12:05:54 GMT 2012 Rank 76 Aligned Residues 113 % Identity 12% Template d1sqna_ SCOP info Nuclear receptor ligand-binding domain Nuclear receptor ligand-binding domain Nuclear receptor ligand-binding domain Resolution 1.45

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		47	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	E	I	S	R	L	D	T	L	L	D	E	N	G	W	Q	T	E	Q	K	S	W	A	A	L	C	R	F	C	G	D	L	H	C	K	T	Q	S	D	F	F	D	I	I	G	F	K	Q	F	L	F	E	Q	T	E	M	S	P	G	T	V	R	E	Y	V	V	R	L	R	R	L	G	N	H	L	H	E	Q	N	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	S	L	P	G	F	R	N	L	H	I	D	D	Q	I	T	L	I	Q	Y	S	W	M	S	L	M	V	F	G	L	G	W	R	S	Y	K	H	V	S	G	Q	M	L	Y	F	A	P	D	L	I	L	N	E	Q	R	M	K	E	S	S	F	Y	S	L	C	L	T	M	W	Q	I	P	Q	E	F	V	K	L	Q	V
Template Known Secondary structure				S	T	T	G	G	G	S																														T	T	S	S					T	T					G	G	G			S																					T
Template Predicted Secondary structure
Template SS confidence
		734	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.
		127	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.		.	.	.	.	.	.									.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																		.							.	.	.	.	.	.	.	.
Query SS confidence																		.							.	.	.	.	.	.	.	.
Query Sequence		S	L	D	Q	L	Q	D	G	F	L	D	E	I	L	A	P	.	W	L	P	T	T	S	.	.	.	.	.	.	.	.	T	N	N	Y	R	I	A	L	R	K	Y
Query Conservation																		.							.	.	.	.	.	.	.	.
Alig confidence																		.							.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	Q	E	E	F	L	C	M	K	V	L	L	L	L	N	T	I	P	L	E	G	L	R	S	Q	T	Q	F	E	E	M	R	S	S	Y	I	R	E	L	I	K	A
Template Known Secondary structure															T	S				T	T			T	T
Template Predicted Secondary structure
Template SS confidence
		814	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions