Return to main results Retrieve Phyre Job Id

Job DescriptionP52627
Confidence34.30%DateThu Jan 5 12:05:54 GMT 2012
Rank15Aligned Residues40
% Identity28%Templatec2fvuA_
PDB info PDB header:transcriptionChain: A: PDB Molecule:regulatory protein sir3; PDBTitle: structure of the yeast sir3 bah domain
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   71........80.........90.........100.........110....
Predicted Secondary structure 








Query SS confidence 











































Query Sequence  LCRFCGDLHCKTQSDFFDIIGFKQFLFEQTEMSPGTVREYVVRL
Query Conservation 





 
 
     



 





 
















Alig confidence 














.











...












Template Conservation 
 
 



 
  
  . 

      
 
... 


   



 
Template Sequence  LVRYACEPTAEKFVP. IDIFQIIRRVKE. . . MEPKQSDEYLKRV
Template Known Secondary structure 

TT
SS
.

...S
Template Predicted Secondary structure 





.

...

Template SS confidence 











































   172.......180...... ...190........ .200.........210.
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions