Return to main results Retrieve Phyre Job Id

Job DescriptionP52627
Confidence84.90%DateThu Jan 5 12:05:54 GMT 2012
Rank3Aligned Residues74
% Identity12%Templatec1crxA_
PDB info PDB header:replication/dnaChain: A: PDB Molecule:cre recombinase; PDBTitle: cre recombinase/dna complex reaction intermediate i
Resolution2.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   8990.........100.........110.........120.........130... ......140.........150.........160..
Predicted Secondary structure 








....




Query SS confidence 












































. . . .




























Query Sequence  IIGFKQFLFEQTEMSPGTVREYVVRLRRLGNHLHEQNISLDQLQD. . . . GFLDEILAPWLPTTSTNNYRIALRKYQHY
Query Conservation 
 





 




















 

 
 
     
  ....  
   
   

    



 




 

Alig confidence 












































....




























Template Conservation   
            
  
   
      
             

   
      
     
  

      
      
Template Sequence  RKNLMDMFRDRQAFSEHTWKMLLSVCRSWAAWCKLNNRKWFPAEPEDVRDYLLYLQARGLAVKTIQQHLGQLNMLHRR
Template Known Secondary structure  TGGGS
T


SS

TT

Template Predicted Secondary structure 













Template SS confidence 













































































   24.....30.........40.........50.........60.........70.........80.........90.........100.
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions