Job Description P33790 Confidence 11.97% Date Thu Jan 5 11:52:39 GMT 2012 Rank 28 Aligned Residues 138 % Identity 11% Template d2i5nl1 SCOP info Bacterial photosystem II reaction centre, L and M subunits Bacterial photosystem II reaction centre, L and M subunits Bacterial photosystem II reaction centre, L and M subunits Resolution 1.96

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		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	G	T	W	T	W	D	S	I	E	K	I	A	L	T	L	S	V	L	A	V	A	V	M	W	V	Q	R	H	N	V	M	D	L	L	G	W	V	A	V	F	V	L	I	S	L	L	V	N	V	R	T	S	V	Q	I	I	D	N	S	D	L	V	K	V	H	R	V	D	N	V	P	V	G	L	A	M	P	L	S
Query Conservation
Alig confidence																																																								.	.	.					.
Template Conservation																																																								.	.	.					.
Template Sequence		L	L	E	G	G	F	W	Q	A	I	T	V	C	A	L	G	A	F	I	S	W	M	L	R	E	V	E	I	S	R	K	L	G	I	G	W	H	V	P	L	A	F	C	V	P	I	F	M	F	C	V	L	Q	V	.	.	.	F	R	P	L	.	L	L	G	S	W	G	H	A	F	P	Y	G	I	L	S	H	L	D
Template Known Secondary structure		G	G	G	T																													T			S																		T	.	.	.					.			T		G	G	G	S			B	S	T	T
Template Predicted Secondary structure																																																								.	.	.					.
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.				.	.	.	.		.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
		104	.	.	.	.	.	110	.	.								.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
Predicted Secondary structure											.	.	.	.	.	.	.
Query SS confidence											.	.	.	.	.	.	.
Query Sequence		L	T	T	R	I	G	H	A	M	.	.	.	.	.	.	.	V	A	S	Y	E	M	I	F	T	Q	P	D	S	V	T	Y	S	K	T	G	M	L	F	G	A	N	L	I	V	K	S	T	D	F	L	S	R	N	P	E	I	I	N	L	F	Q	D	Y	V	Q	N	C	V	L	G	D	I
Query Conservation											.	.	.	.	.	.	.
Alig confidence											.	.	.	.	.	.	.																		.	.	.	.
Template Conservation																																			.	.	.	.
Template Sequence		W	V	N	N	F	G	Y	Q	Y	L	N	W	H	Y	N	P	G	H	M	S	S	V	S	F	L	F	V	N	A	M	A	L	G	.	.	.	.	L	H	G	G	L	I	L	S	V	A	N	P	G	D	G	D	K	V	K	T	A	E	H	E	N	Q	Y	F	R	D	V	V	G	Y	S	I
Template Known Secondary structure									T	T	S		G	G	G																				.	.	.	.													S	T	T																		S
Template Predicted Secondary structure																																			.	.	.	.
Template SS confidence
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.					.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions