 |
Job Description | P33790 | Confidence | 7.80% | Date | Thu Jan 5 11:52:39 GMT 2012 |
Rank | 61 | Aligned Residues | 31 |
% Identity | 3% | Template | c3nnqA_ |
PDB info |
PDB header:viral protein | Chain: A: PDB Molecule:n-terminal domain of moloney murine leukemia virus |
PDBTitle: crystal structure of the n-terminal domain of moloney murine leukemia2 virus integrase, northeast structural genomics consortium target or3
|
Resolution | 2.69 Å |
|
  |   |
136 | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | A | N | L | I | V | K | S | T | D | F | L | S | R | N | P | E | I | I | N | L | F | Q | D | Y | V | Q | N | C | V | L |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |
|
|
|   |
|   |   |   |   |
|
|
|
|   |
|   |   |   |
|   |   |   |
|   |   |
|   |   |
Template Sequence |   |
K | X | K | A | L | L | E | R | S | H | S | P | Y | Y | X | L | N | R | D | R | T | L | K | N | I | T | E | T | C | K | A |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
| S | S |  |  | T | T |  |  |  |  |  |  |  |  |  |  |  |
|  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
67 | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|