Return to main results Retrieve Phyre Job Id

Job DescriptionP33790
Confidence49.21%DateThu Jan 5 11:52:39 GMT 2012
Rank9Aligned Residues62
% Identity10%Templatec2kr6A_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:presenilin-1; PDBTitle: solution structure of presenilin-1 ctf subunit
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   12.......20.........30.... .....40.........50... ......60.........70...
Predicted Secondary structure 



..


.....



Query SS confidence 






















. .


















. . . . .



















Query Sequence  WLRNNLNAIAAFMGTWTWDSIEK. . IALTLSVLAVAVMWVQRHN. . . . . VMDLLGWVAVFVLISLLVNV
Query Conservation         


             ..                   .....                    
Alig confidence 






















..


















.....



















Template Conservation 







 

              



 

  

  
     








  
  


       
Template Sequence  IFYSVLVGKASATASGDWNTTIACFVAILIGLCLTLLLLAIFKKALPALPISITFGLVFYFATDYLVQP
Template Known Secondary structure  S

TTTTT
S
SSSSS



TTTT

Template Predicted Secondary structure 










Template SS confidence 




































































   387..390.........400.........410.........420.........430.........440.........450.....
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions