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Job DescriptionP33790
Confidence27.55%DateThu Jan 5 11:52:39 GMT 2012
Rank13Aligned Residues443
% Identity8%Templatec1ciiA_
PDB info PDB header:transmembrane proteinChain: A: PDB Molecule:colicin ia; PDBTitle: colicin ia
Resolution3.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
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   482.......490.........500.........510.........520.........530.........540.........550.........560.
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Query Sequence  SFGQMMYQTGSGATATQTRDGNMVMDASGAMSRLPVGINATRQIAAAQQEMAREASNRAESALHGFSSSIASAWNTLSQF
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Template Conservation                         
  
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Template Sequence  VFHGTPPAWSSFGNKTIWGGNEWVDDS. . . . . PTRSDIEKRDKEITAYKNTLSAQQKENENKRTEAGKRLSAAIAAREKD
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SGGGG

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   38.40.........50.........60.... .....70.........80.........90.........100.........110..
 
   562.......570.........580.........590.........600.........610.........620.........630.........640.
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Query Sequence  GSNRGSSDSVTGGADSTMSAQDSMMASRMRSAVESYAKAHNISNEQATRELASRSTNASLGLYGDAYAKGHLGISVLGNG
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Template Conservation        
      
          
           
        
      
      
     
              
Template Sequence  ENTLKTLRAGNADAADITRQEFRLLQAELREYGFRTEIAGYDALRLHTESRMLFADADSLRISPREARSLIEQAEKRQKD
Template Known Secondary structure  TT

TT
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   113......120.........130.........140.........150.........160.........170.........180.........190..
 
   642.......650.........660.........670.........680.........690.........700.........710.........720.
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Query Sequence  GGVGLQAGAKASIDGSDLDSHEASSGSRASHDARHDIDARATQDFKEASDYFTSRKVSESGSHTDNNADSRVDQLSAALN
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Template Sequence  AQNADKKAADMLAEYERRKGILDTRLSELEKNGGAALAVLDAQQARLLGQQTRNDRAISEARNKLSSVTESLNTARNALT
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   193......200.........210.........220.........230.........240.........250.........260.........270..
 
   722.......730.........740.........750.........760.........770.........780.........790.........800.
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Query Sequence  SAKQSYDQYTTNMTRSHEYAEMASRTESMSGQMSEDLSQQFAQYVMKNAPQDVEAILTNTSSPEIAERRRAMAWSFVQEQ
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Template Sequence  RAEQQLTQQKNTPDGKTIVSPEKFPGRSSTNDSIVVSGDPRFAGTIKITTSAVIDNRANLNYLLSHSGLDYKRNILN. DR
Template Known Secondary structure  SS
TTTS


S
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   273......280.........290.........300.........310.........320.........330.........340......... 350.
 
   802.......810.........820.........830.........840.........850.........860.........870.........880.
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Query Sequence  VQPGVDNTWRESRRDIGKGMESVPSGGGSQDIIADHQGHQAIIEQRTQDSNIRNDVKHQVDNMVTEYRGNIGDTQNSIRG
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Template Sequence  NPVVTEDVEGDKKIYNAEVAEWDKLRQRLLDARNKITSAESAVNSARNNLSARTNEQKHANDALNALLKEKENIRNQLSG
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   352.......360.........370.........380.........390.........400.........410.........420.........430.
 
   882.......890.........900.........910.........920.........930
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Query Sequence  EENIVKGQYSELQNHHKTEALTQNNKYNEEKLAQERIPGADSPKELLEK
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Template Sequence  INQKIAEEKRKQDELKATKDAINFTTEFLKSVSEKYGAKAEQLAREMAG
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   432.......440.........450.........460.........470.........480
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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