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Job DescriptionP33790
Confidence38.47%DateThu Jan 5 11:52:39 GMT 2012
Rank11Aligned Residues173
% Identity5%Templatec1bg1A_
PDB info PDB header:transcription/dnaChain: A: PDB Molecule:protein (transcription factor stat3b); PDBTitle: transcription factor stat3b/dna complex
Resolution2.25 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   711........720.........730.........740.........750.........760.........770.........780.........790
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Query Sequence  SRVDQLSAALNSAKQSYDQYTTNMTRSHEYAEMASRTESMSGQMSEDLSQQFAQYVMKNAPQDVEAILTNTSSPEIAERR
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Template Sequence  EKQQMLEQHLQDVRKRVQDLEQKMKVVENLQDDFDFNYKTLKSQGDSVTRQKMQQLEQMLTALDQMRRSIVSELAGLLSA
Template Known Secondary structure  TT




TT
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   139140.........150.........160.........170.........180.........190.........200.........210........
 
   791........800.........810.........820.........830.........840.........850.........860.........870
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Query Sequence  RAMAWSFVQEQVQPGVDNTWRESRRDIGKGMESVPSGGGSQDIIADHQGHQAIIEQRTQDSNIRNDVKHQVDNMVTEYRG
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Template Sequence  MEYVQKTLTDEELADWKRRQQIACIGGPPNICLDRLENWITSLAESQLQTRQQIKKLEELQQKVSYKGDPIVQHRPMLEE
Template Known Secondary structure  TTT






S

TT
TTTTT
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   228.230.........240.........250.........260.........270.........280.........290.........300.......
 
   871........880...
Predicted Secondary structure 
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Query Sequence  NIGDTQNSIRGEE
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Template Conservation     

   
   
Template Sequence  RIVELFRNLMKSA
Template Known Secondary structure 
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   308.310.........320
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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