Job Description P24174 Confidence 100.00% Date Thu Jan 5 11:40:50 GMT 2012 Rank 14 Aligned Residues 262 % Identity 16% Template d1yp2a2 SCOP info Nucleotide-diphospho-sugar transferases Nucleotide-diphospho-sugar transferases glucose-1-phosphate thymidylyltransferase Resolution 2.11

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		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.		.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure																																	.																																															.	.
Query SS confidence																																	.																																															.	.
Query Sequence		P	V	V	M	A	G	G	S	G	S	R	L	W	P	L	S	R	V	L	Y	P	K	Q	F	L	C	L	K	G	D	L	.	T	M	L	Q	T	T	I	C	R	L	N	G	V	E	C	E	S	P	V	V	I	C	N	E	Q	H	R	F	I	V	A	E	Q	L	R	Q	L	N	K	L	T	E	N	I	I	L	.	.
Query Conservation																																	.																																															.	.
Alig confidence																	.														.		.																										.																					.	.
Template Conservation																	.														.																												.
Template Sequence		A	S	R	S	V	L	G	I	I	L	R	L	Y	P	L	.	T	K	K	R	A	K	P	A	V	P	L	G	A	.	N	Y	R	L	I	D	I	P	V	S	N	C	L	N	S	N	I	S	K	I	Y	V	L	T	Q	F	N	.	S	A	S	L	N	R	H	L	S	R	A	Y	A	E	G	F	V	E	V	L	A	A
Template Known Secondary structure														T	T	T	.	T	T	T	S		G	G	G				T	T	.	T			T	T										T	T									S			.																						S
Template Predicted Secondary structure																	.														.																												.
Template SS confidence
		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.		.	.	.	.	.	.	.	.	40	.	.	.	.		.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.		.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
								85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	E	P	A	G	R	N	T	A	P	A	I	A	L	A	A	L	A	A	K	R	H	S	P	E	S	D	P	L	M	L	V	L	A	A	D	H	V	I	A	D	E	D	A	F	R	A	A	V	R	N	A	M	P	Y	A	E	A	G	K	L	V	T	F	G	I	V	P	D	L	P	E	T	G	Y
Query Conservation		.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.																							.	.	.														.	.																		.
Template Conservation																														.	.	.														.	.																		.
Template Sequence		Q	Q	S	P	E	N	P	D	W	F	Q	G	T	A	D	A	V	R	Q	Y	L	W	L	F	E	E	H	T	.	.	.	V	L	E	Y	L	I	L	A	G	D	H	L	Y	.	.	R	M	D	Y	E	K	F	I	Q	A	H	R	E	T	D	A	D	.	I	T	V	A	A	L	P	M	D	E	K	R	A	T	A	F
Template Known Secondary structure			S	S	T	T	S						S								T					T	T	S		.	.	.		S							S					.	.														T	T		S	.														T	T	S
Template Predicted Secondary structure																														.	.	.														.	.																		.
Template SS confidence
		108	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.				.	.	.	.	140	.	.	.	.	.	.	.	.			.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.		.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.														.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
Predicted Secondary structure																																				.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																				.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	Y	I	R	R	G	E	V	S	A	G	E	Q	D	M	V	A	F	E	V	A	Q	F	V	E	K	P	N	L	E	T	A	Q	A	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	V	A	S	G	E	Y	Y	W	N	S	G	M	F	L	F	R	A	G	R	Y	L	E	E	L	K	K	Y	R	P	D	I	L
Query Conservation																																				.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence											.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.
Template Conservation											.	.	.	.	.	.	.	.	.																																																								.	.	.	.	.	.	.
Template Sequence		G	L	M	K	I	D	E	E	G	.	.	.	.	.	.	.	.	.	R	I	I	E	F	A	E	K	P	Q	G	E	Q	L	Q	A	M	K	V	D	T	T	I	L	G	L	D	D	K	R	A	K	E	M	P	F	I	A	S	M	G	I	Y	V	I	S	K	D	V	M	L	N	L	L	R	.	.	.	.	.	.	.
Template Known Secondary structure								T	T	S	.	.	.	.	.	.	.	.	.	B							S									T				G	G	G	G	S																															.	.	.	.	.	.	.
Template Predicted Secondary structure											.	.	.	.	.	.	.	.	.																																																								.	.	.	.	.	.	.
Template SS confidence
		182	.	.	.	.	.	.	.	190										.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.
		226	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.			.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.
Predicted Secondary structure																																			.	.
Query SS confidence																																			.	.
Query Sequence		D	A	C	E	K	A	M	S	A	V	D	P	D	L	N	F	I	R	V	D	E	E	A	F	L	A	C	P	E	E	S	V	D	.	.	Y	A	V	M	E	R	T	A	D	A	V	V	V	P	M	D	A	G	W	S	D	V	G	S	W	S	S	L	W	E	I	S	A	H	T	A	E	G	N	V	C	H	G	D	V
Query Conservation																																			.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.																																													.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																											.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	K	F	P	G	A	N	D	F	G	S	E	V	I	P	G	A	T	S	L	G	M	R	V	Q	A	Y	L	Y	D	G	Y	W	E	D	I	G	T	I	E	A	F	Y	N	A	N	L	G	I	T	K	K	P	V	P	D	F	S	.
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T		T	T				T	T	T	T								T	T										S						S	S										G	G	G		S	S	S		S	S		.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																											.
Template SS confidence
																							246	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.
		304	.	.	.	.	.	310	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	N	H	K	T	E	N	S	Y	V	Y	A	E	S	G
Query Conservation
Alig confidence		.	.
Template Conservation		.	.
Template Sequence		.	.	F	Y	D	R	S	A	P	I	Y	T	Q	P	R
Template Known Secondary structure		.	.	S			S	S	S
Template Predicted Secondary structure		.	.
Template SS confidence
				304	.	.	.	.	.	310	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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