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Job DescriptionP24174
Confidence99.79%DateThu Jan 5 11:40:50 GMT 2012
Rank36Aligned Residues208
% Identity21%Templated1vpaa_
SCOP infoNucleotide-diphospho-sugar transferases Nucleotide-diphospho-sugar transferases Cytidylytransferase
Resolution2.67

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   7..10.........20.........30.........40.........50.........60.........70.........80......
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Query Sequence  YPVVMAGGSGSRLWPLSRVLYPKQFLCLKGDLTMLQTTICRLNGVECESPVVICNEQHRFIVAEQLRQLNKLTENIILEP
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Template Sequence  VAILLAAGKGERM. . . . SENVPKQFLEIEG. RMLFEYPLSTFLKSEAIDGVVIVTRREW. . . FEVVEKRVFHEKVLGIVE
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TT.TT
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TT
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   3......10..... ....20........ .30.........40.........50...... ...60.........70....
 
   87..90.........100.........110.........120.........130.........140.........150.........160......
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Query Sequence  AGRNTAPAIALAALAAKRHSPESDPLMLVLAADHVIADEDAFRAAVRNAMPYAEAGKLVTFGIVPDLPETGYGYIRRGEV
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Template Sequence  GGDTRSQSVRSALEFLEKFS. . . PSYVLVHDSARPFLRKKHVSEVLRRAR. . . ETGAATLALKNSDALVRVENDR. . . . .
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SSGGG
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   75....80.........90.... .....100.........110.........120. ........130.........140...
 
   167..170.........180.........190.........200.........210.........220.........230.........240......
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Query Sequence  SAGEQDMVAFEVAQFVEKPNLETAQAYVASGEYYWNSGMFLFRAGRYLEELKKYRPDILDACEKAMSAVDPDLNFIRVDE
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Template Sequence  . . . . . . . . . . . IEYIPRKG. . . . . . . . . . . . . VYRILTPQAFSYEIL. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . K
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   144.....150. ........160...... .
 
   247..250.........260.... .....270.........280.........
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Query Sequence  EAFLACPEESVDYAVMER. TADAVVVPMDAGWSDVGSWSSLWEI
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Template Sequence  KAHENGGEWADDTEPVQKLGVKIALVEGDPLCFKVTFKEDLELA
Template Known Secondary structure  TT



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   168.170.........180.........190.........200.........210.
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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