Job Description P24174 Confidence 99.87% Date Thu Jan 5 11:40:50 GMT 2012 Rank 31 Aligned Residues 231 % Identity 16% Template d1vica_ SCOP info Nucleotide-diphospho-sugar transferases Nucleotide-diphospho-sugar transferases Cytidylytransferase Resolution 1.80

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	L	Y	P	V	V	M	A	G	G	S	G	S	R	L	W	P	L	S	R	V	L	Y	P	K	Q	F	L	C	L	K	G	D	L	T	M	L	Q	T	T	I	C	R	L	N	G	V	E	C	E	S	P	V	V	I	C	N	E	Q	H	R	F	I	V	A	E	Q	L	R	Q	L	N	K	L	T	E	N	I	I	L
Query Conservation
Alig confidence																			.	.	.	.	.	.	.									.																										.	.	.												.	.	.
Template Conservation																			.	.	.	.	.	.	.									.																										.	.	.												.	.	.
Template Sequence		S	F	T	V	I	I	P	A	R	F	A	S	S	R	L	P	G	.	.	.	.	.	.	.	K	P	L	A	D	I	K	G	.	K	P	M	I	Q	H	V	F	E	K	A	L	Q	S	G	A	S	R	V	I	I	A	T	D	N	.	.	.	E	N	V	A	D	V	A	K	S	F	G	.	.	.	A	E	V	C	M
Template Known Secondary structure														S	S	S	T	T	.	.	.	.	.	.	.	G	G	G				T	T	.														T	T		S							S		.	.	.										T	T	.	.	.
Template Predicted Secondary structure																			.	.	.	.	.	.	.									.																										.	.	.												.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.								.	20	.	.	.	.	.	.		.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.				.	.	.	.	.	.	.	.	60	.	.				.	.	.	.	.
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																													.	.	.	.	.
Query SS confidence																																																																													.	.	.	.	.
Query Sequence		E	P	A	G	R	N	T	A	P	A	I	A	L	A	A	L	A	A	K	R	H	S	P	E	S	D	P	L	M	L	V	L	A	A	D	H	V	I	A	D	E	D	A	F	R	A	A	V	R	N	A	M	P	Y	A	E	A	G	K	L	V	T	F	G	I	V	P	D	L	P	E	T	G	Y	G	.	.	.	.	.
Query Conservation																																																																													.	.	.	.	.
Alig confidence																									.	.																												.	.	.																					.	.	.	.	.
Template Conservation																									.	.																												.	.	.
Template Sequence		T	S	V	N	H	N	S	G	T	E	R	L	A	E	V	V	E	K	L	A	I	P	D	.	.	N	E	I	I	V	N	I	Q	G	D	E	P	L	I	P	P	V	I	V	R	Q	V	A	D	N	L	A	.	.	.	K	F	N	V	N	M	A	S	L	A	V	K	I	H	D	A	E	E	L	F	N	P	N	A	V
Template Known Secondary structure					S	S														T	T			T	.	.	T								T	T		T	T															.	.	.			T		S															T		T	T	S
Template Predicted Secondary structure																									.	.																												.	.	.
Template SS confidence
		68	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90			.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.				.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.										.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
Predicted Secondary structure																													.	.	.	.	.	.	.	.	.
Query SS confidence																													.	.	.	.	.	.	.	.	.
Query Sequence		Y	I	R	R	G	E	V	S	A	G	E	Q	D	M	V	A	F	E	V	A	Q	F	V	E	K	P	N	.	.	.	.	.	.	.	.	.	L	E	T	A	Q	A	Y	V	A	S	G	E	Y	Y	W	N	S	G	M	F	L	F	R	A	G	R	Y	L	E	E	L	K	K	Y	R	P	D	I	L	D	A	C	E	K
Query Conservation																													.	.	.	.	.	.	.	.	.
Alig confidence										.	.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.																										.
Template Conservation										.	.	.	.	.	.	.	.	.																																													.
Template Sequence		K	V	L	T	D	K	D	G	.	.	.	.	.	.	.	.	.	Y	V	L	Y	F	S	R	S	V	I	P	Y	D	R	D	Q	F	M	N	L	Q	D	V	Q	K	V	Q	L	S	D	A	Y	L	R	H	I	G	I	Y	A	Y	R	A	G	.	F	I	K	Q	Y	V	Q	W	A	P	T	Q	L	E	N	L	E	K
Template Known Secondary structure							T	T	S	.	.	.	.	.	.	.	.	.	B						S	S		S	S							T	T		S		G	G	G					T	T														.								S										T
Template Predicted Secondary structure										.	.	.	.	.	.	.	.	.																																													.
Template SS confidence
		143	.	.	.	.	.	.	150										.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.		.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.
		231	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.		.	.	.	280	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																.
Query SS confidence																																																.
Query Sequence		A	M	S	A	V	D	P	D	L	N	F	I	R	V	D	E	E	A	F	L	A	C	P	E	E	S	V	D	Y	A	V	M	E	R	T	A	D	A	V	V	V	P	M	D	A	G	.	W	S	D	V	G	S	W	S	S	L	W	E	I
Query Conservation																																																.
Alig confidence							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.
Template Conservation							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	E	Q	L	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	L	Y	N	G	E	R	I	H	V	E	L	A	K	E	V	P	A	V	G	V	D	T	A	E	D	L	E	K	V
Template Known Secondary structure			T	T			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				T	T									S	S								S
Template Predicted Secondary structure							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		213	.	.	.	.																										.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions