Job Description P24174 Confidence 99.94% Date Thu Jan 5 11:40:50 GMT 2012 Rank 28 Aligned Residues 221 % Identity 18% Template d1tzfa_ SCOP info Nucleotide-diphospho-sugar transferases Nucleotide-diphospho-sugar transferases Cytidylytransferase Resolution 2.10

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure																																																																														.	.	.	.
Query SS confidence																																																																														.	.	.	.
Query Sequence		K	L	Y	P	V	V	M	A	G	G	S	G	S	R	L	W	P	L	S	R	V	L	Y	P	K	Q	F	L	C	L	K	G	D	L	T	M	L	Q	T	T	I	C	R	L	N	G	V	E	C	E	S	P	V	V	I	C	N	E	Q	H	R	F	I	V	A	E	Q	L	R	Q	L	N	K	L	T	E	.	.	.	.
Query Conservation																																																																														.	.	.	.
Alig confidence																.	.	.	.	.	.	.	.	.										.																											.																	.	.	.	.
Template Conservation																.	.	.	.	.	.	.	.	.										.																											.
Template Sequence		A	S	K	A	V	I	L	A	G	G	L	G	V	K	.	.	.	.	.	.	.	.	.	P	K	P	M	V	E	I	G	G	.	K	P	I	L	W	H	I	M	K	M	Y	S	V	H	G	I	K	D	F	I	I	C	C	G	Y	K	.	G	Y	V	I	K	E	Y	F	A	N	Y	F	L	H	M	S	D	V	T	F
Template Known Secondary structure											S					.	.	.	.	.	.	.	.	.		G	G	G				T	T	.														T	T										T	T	.										T						S
Template Predicted Secondary structure																.	.	.	.	.	.	.	.	.										.																											.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.										.	.	.	.	20	.	.	.	.		.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50		.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
																					81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	I	I	L	E	P	A	G	R	N	T	A	P	A	I	A	L	A	A	L	A	A	K	R	H	S	P	E	S	D	P	L	M	L	V	L	A	A	D	H	V	I	A	D	E	D	A	F	R	A	A	V	R	N	A	M	P	Y	A	E	A
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.													.	.																.	.	.
Template Conservation																																											.	.	.	.	.													.	.																.	.	.
Template Sequence		H	M	A	E	N	R	M	E	V	H	H	K	R	V	E	P	W	N	V	T	L	V	D	T	G	D	S	S	M	T	G	G	R	L	K	R	V	A	E	Y	V	.	.	.	.	.	K	D	D	E	A	F	L	F	T	Y	G	D	.	.	G	V	A	D	L	D	I	K	A	T	I	D	F	H	K	.	.	.	A	H
Template Known Secondary structure			G	G	G	T					T	T															S	S										T	G	G	G	T	.	.	.	.	.	T	T	S	S							T	T	.	.																.	.	.
Template Predicted Secondary structure																																											.	.	.	.	.													.	.																.	.	.
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.						120	.	.	.	.	.	.	.	.	.	130	.			.	.	.	.	.	.	.	.	140	.	.	.	.	.	.				.	.
		142	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	K	L	V	T	F	G	I	V	P	D	L	P	E	T	G	Y	G	Y	I	R	R	G	E	V	S	A	G	E	Q	D	M	V	A	F	E	V	A	Q	F	V	E	K	P	N	L	E	T	A	Q	A	Y	V	A	S	G	E	Y	Y	W	N	S	G	M	F	L	F	R	A	G	R	Y	L	E	E	L	K	K	Y	R
Query Conservation
Alig confidence										.	.																	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.
Template Conservation										.	.																	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.
Template Sequence		G	K	K	A	T	L	T	A	.	.	T	F	P	P	G	R	F	G	A	L	D	I	Q	A	G	Q	.	.	.	.	.	.	.	.	.	.	V	R	S	F	Q	E	K	P	K	G	D	.	.	.	.	.	.	.	.	.	G	A	M	I	N	G	G	F	F	V	L	N	P	S	V	I	.	.	.	.	.	.	.	.
Template Known Secondary structure				S						.	.							S							T	T		.	.	.	.	.	.	.	.	.	.							S		S			.	.	.	.	.	.	.	.	.	S												G	G	G	G	.	.	.	.	.	.	.	.
Template Predicted Secondary structure										.	.																	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.
Template SS confidence
		149	150	.	.	.	.	.	.			.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.											.	.	.	.	.	.	.	180	.	.	.										.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.
		222	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	D	I	L	D	A	C	E	K	A	M	S	A	V	D	P	D	L	N	F	I	R	V	D	E	E	A	F	L	A	C	P	E	E	S	V	D	Y	A	V	M	E	R	T	A	D	A	V	V	V	P	M	D	A	G	W	S	D	V	G	S	W	S	S	L	W	E	I	S	A	H	T	A	E	G	N	V
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	D	L	I	D	N	D	A	T	T	W	E	Q	E	P	L	M	T	.	.	.	.	.	.	.	.	.	.	L	A	Q	Q	G	E	L	M	A	F	E	H	P	G	F	W	Q	P	M	D	T	L	R	D	K	V	Y	L	E	G	L	W	E	K	G	K	A
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	G	G			S	T	T			T	T	T						.	.	.	.	.	.	.	.	.	.				T	T									S							S													T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.
Template SS confidence
															200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.											.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions