Job Description P24174 Confidence 99.90% Date Thu Jan 5 11:40:50 GMT 2012 Rank 29 Aligned Residues 225 % Identity 16% Template d1jyka_ SCOP info Nucleotide-diphospho-sugar transferases Nucleotide-diphospho-sugar transferases Cytidylytransferase Resolution 1.50

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	S	K	L	Y	P	V	V	M	A	G	G	S	G	S	R	L	W	P	L	S	R	V	L	Y	P	K	Q	F	L	C	L	K	G	D	L	T	M	L	Q	T	T	I	C	R	L	N	G	V	E	C	E	S	P	V	V	I	C	N	E	Q	H	R	F	I	V	A	E	Q	L	R	Q	L	N	K	L	T	E	N	I
Query Conservation
Alig confidence																						.														.																											.														.
Template Conservation																						.														.																											.														.
Template Sequence		E	I	R	V	K	A	I	I	L	A	A	G	L	G	T	R	L	R	P	L	.	T	E	N	T	P	K	A	L	V	Q	V	N	Q	.	K	P	L	I	E	Y	Q	I	E	F	L	K	E	K	G	I	N	D	I	I	I	I	V	G	Y	L	.	K	E	Q	F	D	Y	L	K	E	K	Y	G	V	.	R	L	V	F
Template Known Secondary structure													S			G	G	G	T	T	T	.	T	S	S	S		G	G	G				T	T	.														T	T										T	T	.	G	G	G	G	T									.
Template Predicted Secondary structure																						.														.																											.														.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.		.	.	.	.	.	.	.	30	.	.	.	.	.		.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.		.	.	.	.	.	.	.	.	70	.	.	.	.		.	.	.	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	L	E	P	A	G	R	N	T	A	P	A	I	A	L	A	A	L	A	A	K	R	H	S	P	E	S	D	P	L	M	L	V	L	A	A	D	H	V	I	A	D	E	D	A	F	R	A	A	V	R	N	A	M	P	Y	A	E	A	G	K	L	V	T	F	G	I	V	P	D	L	P	E	T	G	Y	G	Y	I	R
Query Conservation
Alig confidence																								.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.
Template Conservation																								.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.
Template Sequence		N	D	K	Y	A	D	Y	N	N	F	Y	S	L	Y	L	V	K	E	E	L	A	N	.	.	.	.	.	.	.	.	S	Y	V	I	D	A	D	N	Y	L	F	K	N	.	.	.	.	.	.	.	.	.	.	.	X	F	R	N	D	L	T	R	S	T	Y	F	S	V	Y	R	E	D	C	T	N	E	W	F	L	V
Template Known Secondary structure			T	T	T	T	T	S		T						T	T	G	G	G		T	T	.	.	.	.	.	.	.	.						T	T				S	S		.	.	.	.	.	.	.	.	.	.	.				S				S									S	S		S	S
Template Predicted Secondary structure																								.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100									.	.	.	.	.	.	.	.	.	110	.	.	.												.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	G	E	V	S	A	G	E	Q	D	M	V	A	F	E	V	A	Q	F	V	E	K	P	N	L	E	T	A	Q	A	Y	V	A	S	G	E	Y	Y	W	N	S	G	M	F	L	F	R	A	G	R	Y	L	E	E	L	K	K	Y	R	P	D	I	L	D	A	C	E	K	A	M	S	A	V	D	P	D	L	N	F	I
Query Conservation
Alig confidence							.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.
Template Conservation							.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Y	G	D	D	Y	.	.	.	.	.	.	.	.	.	K	V	Q	D	I	I	V	D	S	K	A	.	.	.	.	.	.	.	.	.	.	.	G	R	I	L	S	G	V	S	F	W	D	A	P	T	A	.	.	.	.	.	.	.	.	.	.	.	E	K	I	V	S	F	I	D	K	A	Y	V	S	G	E	F	V	D
Template Known Secondary structure				T	T		.	.	.	.	.	.	.	.	.	B									S	S	.	.	.	.	.	.	.	.	.	.	.			B			S										.	.	.	.	.	.	.	.	.	.	.												T	T	T			T	T
Template Predicted Secondary structure							.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		140	.	.	.	.										.	.	.	.	.	150	.	.	.	.	.												.	.	.	.	160	.	.	.	.	.	.	.	.	.	170												.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.
		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.		.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.
Predicted Secondary structure																																			.
Query SS confidence																																			.
Query Sequence		R	V	D	E	E	A	F	L	A	C	P	E	E	S	V	D	Y	A	V	M	E	R	T	A	D	A	V	V	V	P	M	D	A	.	G	W	S	D	V	G	S	W	S	S	L	W	E	I	S	A
Query Conservation																																			.
Alig confidence											.	.	.	.	.	.	.	.	.	.															.
Template Conservation											.	.	.	.	.	.	.	.	.	.
Template Sequence		L	Y	W	D	N	X	V	K	D	.	.	.	.	.	.	.	.	.	.	N	I	K	E	L	D	V	Y	V	E	E	L	E	G	N	S	I	Y	E	I	D	S	V	Q	D	Y	R	K	L	E	E
Template Known Secondary structure				T	T					T	.	.	.	.	.	.	.	.	.	.	T	G	G	G										T	T	S						S
Template Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.
Template SS confidence
		189	190	.	.	.	.	.	.	.											.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions