Job Description P24174 Confidence 98.50% Date Thu Jan 5 11:40:50 GMT 2012 Rank 125 Aligned Residues 207 % Identity 17% Template d1jv1a_ SCOP info Nucleotide-diphospho-sugar transferases Nucleotide-diphospho-sugar transferases UDP-glucose pyrophosphorylase Resolution 1.90

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.			.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.												.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																			.	.																	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																			.	.																	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	S	K	L	Y	P	V	V	M	A	G	G	S	G	S	R	L	W	P	L	S	R	V	L	Y	P	K	Q	F	L	C	L	K	.	.	G	D	L	T	M	L	Q	T	T	I	C	R	L	N	G	V	.	.	.	.	.	.	.	.	.	.	.	E	C	E	S	P	V	V	I	C	N	E	Q	H	R	F	I	V	A
Query Conservation																																			.	.																	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																			.	.	.	.													.	.																	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																			.	.	.	.
Template Sequence		Q	N	K	V	A	V	L	L	L	A	G	G	Q	G	T	R	L	.	.	.	.	G	V	A	Y	P	K	G	M	Y	D	V	G	L	P	S	R	K	T	L	F	Q	I	Q	A	E	R	I	L	K	L	Q	Q	V	A	E	K	Y	Y	G	N	K	C	I	I	P	W	Y	I	M	T	S	G	R	T	M	E	S	T	K
Template Known Secondary structure		T	T														T	T	.	.	.	.	S		S	S		G	G	G						T	T																								S	S												T	T	T
Template Predicted Secondary structure																			.	.	.	.
Template SS confidence
		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.					.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
		70	.	.	.	.	.	.	.	.																													.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.
Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	Q	L	R	Q	L	N	K	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	E	N	I	I	L	E	P	A	G	R	N	T	A	P	A	I	A	L	A	A	L	A	A	K	R	H	S	P	E	S	D	P	L	M	L	V	L	A	A	D	H	V
Query Conservation											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	F	F	T	K	H	K	Y	F	G	L	K	K	E	N	V	I	F	F	Q	Q	G	M	L	P	A	M	S	F	D	G	K	I	I	L	E	E	K	N	K	V	S	M	A	P	D	G	N	G	G	L	Y	R	A	L	A	A	Q	N	I	V	E	D	M	E	Q	R	G	I	W	S	I	H	V	Y	C	V	D	N	I
Template Known Secondary structure							T	G	G	G	G	S		G	G	G														T	T	S		B					T	T									G	G	G								T	T								T	T									T	T	B	T
Template Predicted Secondary structure
Template SS confidence
		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.
		122	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	A	D	E	D	A	F	R	A	A	V	R	N	A	M	P	Y	A	E	A	G	K	L	V	T	F	G	I	V	P	D	L	P	E	T	G	Y	G	Y	I	R	R	G	E	V	S	A	G	E	Q	D	M	V	A	F	E	V	A	Q	F	V	E	K	P	N	L	E	T	A	Q	A	Y	V	A	S	G	E	Y	Y	W
Query Conservation
Alig confidence						.	.	.																																						.	.	.	.	.	.	.	.
Template Conservation						.	.	.																																						.	.	.	.	.	.	.	.
Template Sequence		L	V	K	V	.	.	.	A	D	P	R	F	I	G	F	C	I	Q	K	G	A	D	C	G	A	K	V	V	E	K	T	N	P	T	E	P	V	G	V	V	C	R	V	D	.	.	.	.	.	.	.	.	G	V	Y	Q	V	V	E	Y	S	E	I	S	L	A	T	A	Q	K	R	S	S	D	G	R	L	L	F	N
Template Known Secondary structure		T			T	.	.	.	T											T	T		S										S	T	T		S								T	.	.	.	.	.	.	.	.	T							G	G	G	S								B		T	T	S	S	B	S	S
Template Predicted Secondary structure						.	.	.																																						.	.	.	.	.	.	.	.
Template SS confidence
		256	.	.	.				260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.									.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.
				202	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
Predicted Secondary structure		.	.
Query SS confidence		.	.
Query Sequence		.	.	N	S	G	M	F	L	F	R	A	G	R	Y	L	E	E	L	K	K	Y	R	P	D	I
Query Conservation		.	.
Alig confidence		.	.
Template Conservation
Template Sequence		A	G	N	I	A	N	H	F	F	T	V	P	F	L	R	D	V	V	N	V	Y	E	P	Q	L
Template Known Secondary structure																					T	T	G	G	G
Template Predicted Secondary structure
Template SS confidence
		325	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions