Job Description P24174 Confidence 100.00% Date Thu Jan 5 11:40:50 GMT 2012 Rank 11 Aligned Residues 233 % Identity 19% Template d1iina_ SCOP info Nucleotide-diphospho-sugar transferases Nucleotide-diphospho-sugar transferases glucose-1-phosphate thymidylyltransferase Resolution 2.10

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.			.	.
Predicted Secondary structure																																																																														.	.
Query SS confidence																																																																														.	.
Query Sequence		M	A	Q	S	K	L	Y	P	V	V	M	A	G	G	S	G	S	R	L	W	P	L	S	R	V	L	Y	P	K	Q	F	L	C	L	K	G	D	L	T	M	L	Q	T	T	I	C	R	L	N	G	V	E	C	E	S	P	V	V	I	C	N	E	Q	H	R	F	I	V	A	E	Q	L	R	Q	L	N	.	.	K	L
Query Conservation																																																																														.	.
Alig confidence					.	.																		.														.																																								.	.
Template Conservation					.	.																		.														.
Template Sequence		M	K	T	.	.	R	K	G	I	I	L	A	G	G	S	G	T	R	L	Y	P	V	.	T	M	A	V	S	Q	Q	L	L	P	I	Y	D	.	K	P	M	I	Y	Y	P	L	S	T	L	M	L	A	G	I	R	D	I	L	I	I	S	T	P	Q	D	T	P	R	F	Q	Q	L	L	G	D	G	S	Q	W	G	L
Template Known Secondary structure					.	.									S			G	G	G	T	T	T	.	T	S	S	S		G	G	G	S			T	T	.			T	T										T	T										T	T	T									T	T	S	G	G	G	T
Template Predicted Secondary structure					.	.																		.														.
Template SS confidence
		1	.	.			.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20		.	.	.	.	.	.	.	.	.	30	.	.	.		.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	E	N	I	I	L	E	P	A	G	R	N	T	A	P	A	I	A	L	A	A	L	A	A	K	R	H	S	P	E	S	D	P	L	M	L	V	L	A	A	D	H	V	I	A	D	E	D	A	F	R	A	A	V	R	N	A	M	P	Y	A	E	A	G	K	L	V	T	F	G	I	V	P	D	L	P	E	T	G	Y
Query Conservation
Alig confidence																										.	.	.	.	.	.																			.										.	.	.
Template Conservation																										.	.	.	.	.	.																			.										.	.	.
Template Sequence		N	L	Q	Y	K	V	Q	P	S	P	D	G	L	A	Q	A	F	I	I	G	E	E	F	I	.	.	.	.	.	.	G	H	D	D	C	A	L	V	L	G	D	N	I	F	Y	G	H	D	.	L	P	K	L	M	E	A	A	V	.	.	.	N	K	E	S	G	A	T	V	F	A	Y	H	V	N	D	P	E	R	Y
Template Known Secondary structure									S	S				T	T						T					.	.	.	.	.	.	T	T	S							T	T						T	T	.										.	.	.			S	S	S									S		G	G	G	S
Template Predicted Secondary structure																										.	.	.	.	.	.																			.										.	.	.
Template SS confidence
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100							.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.		.	120	.	.	.	.	.	.	.				.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	Y	I	R	R	G	E	V	S	A	G	E	Q	D	M	V	A	F	E	V	A	Q	F	V	E	K	P	N	L	E	T	A	Q	A	Y	V	A	S	G	E	Y	Y	W	N	S	G	M	F	L	F	R	A	G	R	Y	L	E	E	L	K	K	Y	R	P	D	I	L	D	A	C	E	K	A	M	S	A	V	D	P	D
Query Conservation
Alig confidence											.	.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation											.	.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	V	V	E	F	D	Q	K	G	.	.	.	.	.	.	.	.	.	T	A	V	S	L	E	E	K	P	L	.	.	.	.	.	.	.	.	Q	P	K	S	N	Y	A	V	T	G	L	Y	F	Y	D	N	S	V	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	M	A	K	N	L	K	P	S
Template Known Secondary structure								S	S	S	.	.	.	.	.	.	.	.	.								S		S	.	.	.	.	.	.	.	.	S		S		S											T	T			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure											.	.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		147	.	.	150	.	.	.	.	.										.	.	.	.	160	.	.	.	.	.									.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.																	.	.	.	.	.	190	.	.	.
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.		.	.	.	280	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																								.
Query SS confidence																																								.
Query Sequence		L	N	F	I	R	V	D	E	E	A	F	L	A	C	P	E	E	S	V	D	Y	A	V	M	E	R	T	A	D	A	V	V	V	P	M	D	A	G	.	W	S	D	V	G	S	W	S	S	L	W	E	I
Query Conservation																																								.
Alig confidence															.	.	.	.	.	.	.	.	.																	.
Template Conservation															.	.	.	.	.	.	.	.	.
Template Sequence		A	R	G	E	L	E	I	T	D	I	N	R	I	.	.	.	.	.	.	.	.	.	Y	M	E	Q	G	R	L	S	V	A	M	M	G	R	G	Y	A	W	L	D	T	G	T	H	Q	S	L	I	E	A
Template Known Secondary structure		T	T	S	S										.	.	.	.	.	.	.	.	.				T	T									T	T							S	S
Template Predicted Secondary structure															.	.	.	.	.	.	.	.	.
Template SS confidence
		194	.	.	.	.	.	200	.	.	.	.	.	.										.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions