Return to main results Retrieve Phyre Job Id

Job DescriptionP24174
Confidence25.13%DateThu Jan 5 11:40:50 GMT 2012
Rank240Aligned Residues89
% Identity12%Templated1dzra_
SCOP infoDouble-stranded beta-helix RmlC-like cupins dTDP-sugar isomerase
Resolution2.17

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   386...390.........400... ......410.........420. ....... .430.........440.........
Predicted Secondary structure 










...


..........

...











Query SS confidence 

















. . .

















. . . . . . . . . .






. . .




















Query Sequence  QVKRITVKPGEGLSVQMH. . . HHRAEHWVVVAGTAKVTI. . . . . . . . . . DGDIKLL. . . GENESIYIPLGATHCLENPGK
Query Conservation   

 
 
 

  

 
 
...  
 
 
 

 
 
 
  ..........       ...    
  

 
  
 
 
 
 
Alig confidence 

















...

















..........






...




















Template Conservation 
 
 
 
  
 


 
 
  
  
 


 
  
 
 

 



  




      

      
 

 
 



  
 
Template Sequence  QDNHSKSKKNVLRGLHFQRGENAQGKLVRCAVGEVFDVAVDIRKESPTFGQWVGVNLSAENKRQLWIPEGFAHGFVTLSE
Template Known Secondary structure  TTB
GGG


S

TT
TTTT
TTT


TT
SS
Template Predicted Secondary structure 


































Template SS confidence 















































































   48.50.........60.........70.........80.........90.........100.........110.........120.......
 
   450.........460.........470....
Predicted Secondary structure 













Query SS confidence 
























Query Sequence  IPLDLIEVRSGSYLEEDDVVRFADR
Query Conservation    
  



 
  
 



 
  
 
Alig confidence 
























Template Conservation       
     
 
  
 

   

Template Sequence  YAEFLYKATNYYSPSSEGSILWNDE
Template Known Secondary structure  SS


TTT

TT
T
Template Predicted Secondary structure 



















Template SS confidence 
























   128.130.........140.........150..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions