Job Description P24174 Confidence 99.70% Date Thu Jan 5 11:40:50 GMT 2012 Rank 42 Aligned Residues 225 % Identity 17% Template c3tqdA_ PDB info PDB header:transferase Chain: A: PDB Molecule:3-deoxy-manno-octulosonate cytidylyltransferase; PDBTitle: structure of the 3-deoxy-d-manno-octulosonate cytidylyltransferase2 (kdsb) from coxiella burnetii Resolution 1.80 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.		.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure																									.
Query SS confidence																									.
Query Sequence		L	Y	P	V	V	M	A	G	G	S	G	S	R	L	W	P	L	S	R	V	L	Y	P	.	K	Q	F	L	C	L	K	G	D	L	T	M	L	Q	T	T	I	C	R	L	N	G	V	E	C	E	S	P	V	V	I	C	N	E	Q	H	R	F	I	V	A	E	Q	L	R	Q	L	N	K	L	T	E	N	I	I	L
Query Conservation																									.
Alig confidence									.	.	.	.	.				.	.	.	.	.	.			.									.																										.	.	.													.
Template Conservation									.	.	.	.	.				.	.	.	.	.	.												.																										.	.	.													.
Template Sequence		F	R	V	I	I	P	A	.	.	.	.	.	R	F	D	.	.	.	.	.	.	L	P	G	K	A	L	V	D	I	A	G	.	K	P	X	I	Q	H	V	Y	E	S	A	I	K	S	G	A	E	E	V	V	I	A	T	D	D	.	.	.	K	R	I	R	Q	V	A	E	D	F	G	A	.	V	V	C	X	T	S
Template Known Secondary structure									.	.	.	.	.				.	.	.	.	.	.		T	T	G	G	G				T	T	.														T	T		S							S		.	.	.										T	T		.
Template Predicted Secondary structure									.	.	.	.	.				.	.	.	.	.	.												.																										.	.	.													.
Template SS confidence
		3	.	.	.	.	.	.						10	.	.							.	.	.	.	.	.	.	20	.	.	.		.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.				.	50	.	.	.	.	.	.	.	.	.	60		.	.	.	.	.	.
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	P	A	G	R	N	T	A	P	A	I	A	L	A	A	L	A	A	K	R	H	S	P	E	S	D	P	L	M	L	V	L	A	A	D	H	V	I	A	D	E	D	A	F	R	A	A	V	R	N	A	M	P	Y	A	E	A	G	K	L	V	T	F	G	I	V	P	D	L	P	E	T	G	Y	G	Y	I	R	R	G
Query Conservation
Alig confidence																							.	.	.	.
Template Conservation																							.	.	.	.
Template Sequence		S	D	H	Q	S	G	T	E	R	I	A	E	A	A	V	A	L	G	F	E	D	.	.	.	.	D	E	I	I	V	C	L	Q	G	D	E	P	L	I	P	P	D	A	I	R	K	L	A	E	D	L	D	E	H	D	K	V	A	S	L	C	T	P	I	T	E	V	D	E	L	F	N	P	H	S	T	K	V	V	L
Template Known Secondary structure		T	T			S												T	T			T	.	.	.	.	T								T	T																																				T		T	T	S
Template Predicted Secondary structure																							.	.	.	.
Template SS confidence
		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90					.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.							.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
Predicted Secondary structure																							.	.	.	.	.	.
Query SS confidence																							.	.	.	.	.	.
Query Sequence		E	V	S	A	G	E	Q	D	M	V	A	F	E	V	A	Q	F	V	E	K	P	.	.	.	.	.	.	N	L	E	T	A	Q	A	Y	V	A	S	G	E	Y	Y	W	N	S	G	M	F	L	F	R	A	G	R	Y	L	E	E	L	K	K	Y	R	P	D	I	L	D	A	C	E	K	A	M	S	A	V	D	P	D
Query Conservation																							.	.	.	.	.	.
Alig confidence						.	.	.	.	.	.	.	.										.	.	.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation						.	.	.	.	.	.	.	.																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		N	R	R	N	.	.	.	.	.	.	.	.	Y	A	L	Y	F	S	H	A	P	I	P	W	G	R	D	T	F	S	D	K	E	N	L	Q	L	N	G	S	H	Y	R	H	V	G	I	Y	A	Y	R	V	G	F	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure			T	T	S	.	.	.	.	.	.	.	.	B						S	S		S	S			T	T	T	T	T		G	G	G				S	S																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure						.	.	.	.	.	.	.	.																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		148	.	150	.									.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260								.	.	.	.	.	.	.	.	.	270	.	.	.	.	.		.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.
Predicted Secondary structure																								.	.	.	.	.	.	.																.
Query SS confidence																								.	.	.	.	.	.	.																.
Query Sequence		L	N	F	I	R	V	D	E	E	A	F	L	A	C	P	E	E	S	V	D	Y	A	.	.	.	.	.	.	.	V	M	E	R	T	A	D	A	V	V	V	P	M	D	A	.	G	W	S	D	V	G	S	W	S	S	L	W	E	I	S	A
Query Conservation																								.	.	.	.	.	.	.																.
Alig confidence		.	.	.	.	.	.	.	.															.	.	.	.	.	.	.																.
Template Conservation		.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	E	E	Y	L	S	W	D	A	C	P	A	E	K	X	E	A	L	E	Q	L	R	I	L	W	H	G	G	R	I	H	X	V	V	A	K	S	K	C	P	P	G	V	D	T	E	E	D	L	E	R	V	R	A
Template Known Secondary structure		.	.	.	.	.	.	.	.						S										T		T	T						T	T									S	S							S	S									T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.
Template SS confidence
										195	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions