Job Description P24174 Confidence 100.00% Date Thu Jan 5 11:40:50 GMT 2012 Rank 18 Aligned Residues 253 % Identity 16% Template c3pnnA_ PDB info PDB header:transferase Chain: A: PDB Molecule:conserved domain protein; PDBTitle: the crystal structure of a glycosyltransferase from porphyromonas2 gingivalis w83 Resolution 1.90 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	K	L	Y	P	V	V	M	A	G	G	S	G	S	R	L	W	P	L	S	R	V	L	Y	P	K	Q	F	L	C	L	K	G	D	L	T	M	L	Q	T	T	I	C	R	L	N	G	V	E	C	E	S	P	V	V	I	C	N	E	Q	H	R	F	I	V	A	E	Q	L	R	Q	L	N	K	L	T	E	N	I	I
Query Conservation
Alig confidence																					.	.	.	.											.
Template Conservation																					.	.	.	.											.
Template Sequence		X	K	P	T	L	F	V	L	A	A	G	X	G	S	R	Y	G	S	L	.	.	.	.	K	Q	L	D	G	I	G	P	G	G	.	D	T	I	X	D	Y	S	V	Y	D	A	I	R	A	G	F	G	R	L	V	F	V	I	R	H	S	F	E	K	E	F	R	E	K	I	L	T	K	Y	E	G	R	I	P	V	E
Template Known Secondary structure											T	T		B		T	T	S	S	B	.	.	.	.							S	T	T	S	.															T										G	G	G								T					T	T	T	S
Template Predicted Secondary structure																					.	.	.	.											.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.					20	.	.	.	.	.	.	.	.	.		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
		84	.	.	.																		.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.		.	.
Predicted Secondary structure						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																									.
Query SS confidence						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																									.
Query Sequence		L	E	P	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	R	N	T	A	P	A	I	A	L	A	A	L	A	A	K	R	H	S	P	E	S	D	P	L	M	L	V	L	A	A	D	H	V	I	A	D	E	D	A	F	R	A	A	V	R	N	A	M	P	Y	A	E	A	G	K	.	L	V
Query Conservation						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																									.
Alig confidence						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.														.																					.
Template Conservation																																						.	.	.	.	.	.	.														.
Template Sequence		L	V	F	Q	E	L	D	R	L	P	E	G	F	S	C	P	E	G	R	E	K	P	W	G	T	N	H	A	V	L	X	G	R	D	A	I	.	.	.	.	.	.	.	R	E	P	F	A	V	I	N	A	D	D	F	Y	.	G	R	N	G	F	E	V	L	A	R	K	L	X	T	L	E	G	K	Q	G	E	Y	C
Template Known Secondary structure							T	T				T	T					T	T			S										T	T	T	T	T		.	.	.	.	.	.	.		S							S	S		B		.														T	T	T	T		S	S
Template Predicted Secondary structure																																						.	.	.	.	.	.	.														.
Template SS confidence
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.								.	.	.	.	.	.	.	.	120	.	.	.	.		.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
		146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.												.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.
Predicted Secondary structure																																																					.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																					.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	F	G	I	V	P	D	L	P	E	T	G	Y	G	Y	I	R	R	G	E	V	S	A	G	E	Q	D	M	V	A	F	E	V	A	Q	F	V	E	K	P	N	L	E	T	A	Q	A	Y	V	A	S	.	.	.	.	.	.	.	.	.	.	.	G	E	Y	Y	W	N	S	G	M	F	L	F	R	A	G	R	Y	L
Query Conservation																																																					.	.	.	.	.	.	.	.	.	.	.
Alig confidence																													.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.																		.
Template Conservation																													.	.	.	.																																																	.
Template Sequence		X	V	G	Y	R	V	G	N	T	L	S	E	S	G	G	V	S	R	G	V	C	Q	V	D	E	K	H	.	.	.	.	L	L	T	G	V	V	E	R	T	G	I	E	R	T	D	G	T	I	S	F	R	D	E	T	G	K	I	C	T	L	A	E	D	A	P	V	S	X	N	X	W	G	F	T	P	D	Y	F	.
Template Known Secondary structure							G	G	G	S		B	T	T	B											T	T	S	.	.	.	.	B														T	T							T	T	S							T	T												T				.
Template Predicted Secondary structure																													.	.	.	.																																																	.
Template SS confidence
		148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.					.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.
		215	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	E	L	K	K	Y	R	P	D	I	L	D	A	C	E	K	A	M	S	A	V	D	P	D	L	N	F	I	R	V	D	E	E	A	F	L	A	C	P	E	E	S	V	D	Y	A	V	M	E	R	T	A	D	A	V	V	V	P	M	D	A	G	W	S	D	V	G	S	W	S	S	L	W	E	I
Query Conservation
Alig confidence		.	.	.	.																																.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.																																.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	D	Y	S	E	E	L	F	I	N	F	L	N	A	H	G	Q	E	P	K	S	E	F	F	I	P	F	V	V	N	D	L	.	.	.	.	.	.	.	.	.	.	.	I	R	S	G	R	A	S	V	E	V	L	D	T	T	A	R	W	F	G	V	T	Y	S	D	D	R	P	G	V
Template Known Secondary structure		.	.	.	.															T	T		S	S													.	.	.	.	.	.	.	.	.	.	.				T	S									S				B			S	S	G	G	G
Template Predicted Secondary structure		.	.	.	.																																.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
						223	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.												.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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