Job Description P24174 Confidence 98.41% Date Thu Jan 5 11:40:50 GMT 2012 Rank 130 Aligned Residues 205 % Identity 17% Template c3oc9A_ PDB info PDB header:transferase Chain: A: PDB Molecule:udp-n-acetylglucosamine pyrophosphorylase; PDBTitle: crystal structure of putative udp-n-acetylglucosamine2 pyrophosphorylase from entamoeba histolytica Resolution 1.80 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.			.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.												.	.	.		.	.	.	.	.	60	.	.	.	.	.	.	.	.
Predicted Secondary structure																																			.	.																	.	.	.	.	.	.	.	.	.	.	.				.
Query SS confidence																																			.	.																	.	.	.	.	.	.	.	.	.	.	.				.
Query Sequence		Q	S	K	L	Y	P	V	V	M	A	G	G	S	G	S	R	L	W	P	L	S	R	V	L	Y	P	K	Q	F	L	C	L	K	.	.	G	D	L	T	M	L	Q	T	T	I	C	R	L	N	G	V	.	.	.	.	.	.	.	.	.	.	.	E	C	E	.	S	P	V	V	I	C	N	E	Q	H	R	F	I	V
Query Conservation																																			.	.																	.	.	.	.	.	.	.	.	.	.	.				.
Alig confidence																			.	.	.	.													.	.																	.	.	.	.	.	.	.	.	.	.	.				.
Template Conservation																			.	.	.	.
Template Sequence		Q	G	K	T	A	L	I	T	P	A	G	G	Q	G	S	R	L	.	.	.	.	G	F	E	H	P	K	G	M	F	V	L	P	F	E	I	P	K	S	I	F	Q	M	T	S	E	R	L	L	R	L	Q	E	L	A	S	E	Y	S	H	Q	K	N	V	M	I	H	W	F	L	M	T	N	E	E	T	I	E	E	I
Template Known Secondary structure		T	T										S	B		T	T	T	.	.	.	.	T			S	B	G	G	G					S	S	S																										S												T	T	T
Template Predicted Secondary structure																			.	.	.	.
Template SS confidence
		29	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.					.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.
		69	70	.	.	.	.	.	.	.	.																													.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	E	Q	L	R	Q	L	N	K	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	E	N	I	I	L	E	P	A	G	R	N	T	A	P	A	I	A	L	A	A	L	A	A	K	R	H	S	P	E	S	D	P	L	M	L	V	L	A	A	D	H
Query Conservation												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		N	N	Y	F	K	E	H	Q	Y	F	G	L	S	S	E	Q	I	H	C	F	P	Q	G	M	L	P	V	V	D	F	N	G	K	I	L	Y	E	K	K	D	K	P	Y	M	A	P	N	G	H	G	G	L	F	K	A	L	K	D	N	G	I	L	E	F	M	N	E	K	G	I	K	Y	S	V	A	H	N	V	D	N
Template Known Secondary structure								T	G	G	G	G	S		T	T	S												B		T	T	S		B					T	T									G	G	G								T	T									T									T	T	B
Template Predicted Secondary structure
Template SS confidence
		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.
		121	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200
Predicted Secondary structure
Query SS confidence
Query Sequence		V	I	A	D	E	D	A	F	R	A	A	V	R	N	A	M	P	Y	A	E	A	G	K	L	V	T	F	G	I	V	P	D	L	P	E	T	G	Y	G	Y	I	R	R	G	E	V	S	A	G	E	Q	D	M	V	A	F	E	V	A	Q	F	V	E	K	P	N	L	E	T	A	Q	A	Y	V	A	S	G	E	Y	Y
Query Conservation
Alig confidence							.	.	.																																						.	.	.	.	.	.	.	.
Template Conservation							.	.	.																																						.	.	.	.	.	.	.	.
Template Sequence		I	L	C	K	D	.	.	.	V	D	P	N	M	I	G	Y	M	D	L	L	Q	S	E	I	C	I	K	I	V	K	K	G	F	K	E	E	K	V	G	V	L	V	K	E	Q	.	.	.	.	.	.	.	.	E	R	I	K	V	V	E	Y	T	E	L	T	D	E	L	N	K	Q	L	S	N	G	E	F	I	Y	N
Template Known Secondary structure		T	T			S	.	.	.	S											T	T		S										S	T	T		S								T	.	.	.	.	.	.	.	.	T							G	G	G			T	T	T	T		B		T	T	S		B	S	S
Template Predicted Secondary structure							.	.	.																																						.	.	.	.	.	.	.	.
Template SS confidence
		185	.	.	.	.				190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.									.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.
		201		.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.
Predicted Secondary structure			.
Query SS confidence			.
Query Sequence		W	.	N	S	G	M	F	L	F	R	A	G	R	Y	L	E	E	L	K	K	Y	R	P
Query Conservation			.
Alig confidence			.
Template Conservation
Template Sequence		C	G	H	I	S	I	N	G	Y	S	T	S	F	L	E	K	A	A	E	Y	Q	L	P
Template Known Secondary structure																			T	T
Template Predicted Secondary structure
Template SS confidence
		254	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions