Return to main results Retrieve Phyre Job Id

Job DescriptionP24174
Confidence96.16%DateThu Jan 5 11:40:50 GMT 2012
Rank175Aligned Residues87
% Identity16%Templatec3o14B_
PDB info PDB header:gene regulationChain: B: PDB Molecule:anti-ecfsigma factor, chrr; PDBTitle: crystal structure of an anti-ecfsigma factor, chrr (maqu_0586) from2 marinobacter aquaeolei vt8 at 1.70 a resolution
Resolution1.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   375....380.........390.........400.........410.........420.........430.........440.........450....
Predicted Secondary structure 


































Query SS confidence 















































































Query Sequence  KYDSIDAGDRYQVKRITVKPGEGLSVQMHHHRAEHWVVVAGTAKVTIDGDIKLLGENESIYIPLGATHCLENPGKIPLDL
Query Conservation      
       

 
 
 

  

 
 
  
 
 
 

 
 
 
             
  

 
  
 
 
 
   
  
Alig confidence 






























..








..





..



























Template Conservation      
       
 
 
  

   
 
 
 
..

  

 
 ..  
   ..    
     
 
  
 
 
   

 
 
Template Sequence  STSLLHEDERETVTHRKLEPGANLTSEAAGG. . IEVLVLDGD. . VTVNDE. . VLGRNAWLRLPEGEALSATAGARGAKIW
Template Known Secondary structure 
SS

TT


SS
....TT..
TT
TT

Template Predicted Secondary structure 













..
..

..











Template SS confidence 















































































   135....140.........150.........160..... ....170.... .....180 .........190.........200........
 
   455....460.......
Predicted Secondary structure 








Query SS confidence 












Query Sequence  IEVRSGSYLEEDD
Query Conservation 



 
  
 


Alig confidence 












Template Conservation   


 
     
 
Template Sequence  XKTGHLRFVRTPE
Template Known Secondary structure  SGGGG




Template Predicted Secondary structure 









Template SS confidence 












   209210.........220.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions