 |
Job Description | P24174 | Confidence | 94.28% | Date | Thu Jan 5 11:40:50 GMT 2012 |
Rank | 181 | Aligned Residues | 57 |
% Identity | 25% | Template | c3k2oB_ |
PDB info |
PDB header:oxidoreductase | Chain: B: PDB Molecule:bifunctional arginine demethylase and lysyl-hydroxylase |
PDBTitle: structure of an oxygenase
|
Resolution | 1.75 Å |
|
 |
  |   |
394 | . | . | . | . | . | 400 | . | . | . | . | . | . | . | . | . | 410 | |
. | . | . | . | . | . | . | . | . | 420 | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  | . |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
Query Sequence |   |
P | G | E | G | L | S | V | Q | M | H | H | H | R | A | E | H | W | . |
V | V | V | A | G | T | A | K | V | T | I | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
D | G | D | I | K | L | L |
Query Conservation |   |
|
|   |   |
|
|   |
|   |
|   |   |
|   |
|   |
| . |   |
|
|   |
|   |
|   |
|   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|   |
|   |
|
|   |
|   |   |   |
|   |   |   |   |   |   |
|   |
|   |
|   |
|   |
|   |
|
|   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|
Template Sequence |   |
P | R | S | G | T | G | I | H | I | D | P | L | G | T | S | A | W | N | A | L | V | Q | G | H | K | R | W | C | L | F | P | T | S | T | P | R | E | L | I | K | V | T | R | D | E | G | G | N | Q | Q | D | E | A | I | T | W | F | N | V | I | Y | P | R | T | Q | L | P | T | W | P | P | E | F | K | P | L | E | I | L | Q |
Template Known Secondary structure |   |
T | T |
|  |  |  |  |  |
|
| G | G | G |
|  |  |  |  |  |  |  |  | S |
|  |  |  |  |  |  |
| T | T | S |
|  |  |  |  |
|
|
|  |  |  |  | G | G | G | T | T |
|  |  |  |  |  |  |  | T |  |  |  |  | T | S | T | T | S |
| G | G | G |
|
|  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . |
  |
  |   |
429 | 430 | . | . | . | . | . | . | . | . | . | 440 | . | . | . | . | . | . | . | . | . | 450 |
Predicted Secondary structure |   |
|
|
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | E | N | E | S | I | Y | I | P | L | G | A | T | H | C | L | E | N | P | G | K | I |
Query Conservation |   |
  |   |   |   |
|   |   |
|
|   |
|   |   |
|   |
|   |
|   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|
|   |
|
|
|
|   |
|
|
|
|   |
|   |
|
|   |   |
|
Template Sequence |   |
K | P | G | E | T | V | F | V | P | G | G | W | W | H | V | V | L | N | L | D | T | T |
Template Known Secondary structure |   |
| T | T |
|  |  |  |  |
| T | T |
|  |  |  |  |  |  | S | S |
|  |
Template Predicted Secondary structure |   |
|
|
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|