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Job DescriptionP24174
Confidence98.56%DateThu Jan 5 11:40:50 GMT 2012
Rank120Aligned Residues204
% Identity13%Templatec3gueB_
PDB info PDB header:transferaseChain: B: PDB Molecule:utp-glucose-1-phosphate uridylyltransferase 2; PDBTitle: crystal structure of udp-glucose phosphorylase from trypanosoma2 brucei, (tb10.389.0330)
Resolution1.92 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4.....10.........20.........30.........40.........50. ........60.........70.....
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Query Sequence  SKLYPVVMAGGSGSRLWPLSRVLYPKQFLCLKGDLTMLQTTICRLNGV. . . . ECESPVVICNEQHRFIVAEQLRQL. . . .
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Template Sequence  RQAVVLKLNGGLGTGM. . . . GLNGPKSLLQVKNGQTFLDFTALQLEHFRQVRNV. PFMLMNSFSTSGETKNFLRKYPTLY
Template Known Secondary structure  GG




GGG....T
SS
GGGSTTT

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TTTGGGS
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   74.....80......... 90.........100.........110.........120... ......130.........140........
 
   76...80.........90.........100.........110.........120.........
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . NKLTENIILEPAGRNTAPAIALAALAAKRHSPESDPLMLVLAADHVIADEDAFR
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Template Sequence  EVFDSDIELMQNRVPKIRQDNFFPVTYEADPTCEWVPPGHGDVYTVLYSSGKLDYLLGKGYRYMFISNGDNLGATLD. . V
Template Known Secondary structure  TT








TTT

B


TT
GGGG


GGGTSTT

TT
TT



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   151........160.........170.........180.........190.........200.........210.........220....... .
 
   130.........140.........150.........160.........170.........180.........190.........200.........
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Query Sequence  AAVRNAMPYAEAGKLVTFGIVPDLPETGYGYIRRGEVSAGEQDMVAFEVAQFVEKPNLETAQAYVASGEYYWNSGMFLFR
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Template Sequence  RLLDYMHE. . KQLGFLMEVCRRTESDKKGGHLAYKDVIDR. . . . RRFVLRESAQCPKEDEDSFQNIAKHCFFNTNNIWIN
Template Known Secondary structure  ..T
S

TT

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   229230...... ...240.........250.........260...... ...270.........280.........290.........300..
 
   210.........220
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Query Sequence  AGRYLEELKKY
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Template Sequence  LMELKKMMDEQ
Template Known Secondary structure  T
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   309310.........
 
Download:Text version

No model constructed - rank, confidence too low




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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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