Job Description P24174 Confidence 59.04% Date Thu Jan 5 11:40:50 GMT 2012 Rank 223 Aligned Residues 114 % Identity 11% Template c3ca8B_ PDB info PDB header:structural genomics, unknown function Chain: B: PDB Molecule:protein ydcf; PDBTitle: crystal structure of escherichia coli ydcf, an s-adenosyl-l-methionine2 utilizing enzyme Resolution 1.80 Å

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		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.																										.	.	.	.	.	.	.	.	70	.	.
Predicted Secondary structure																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	L	W	P	L	S	R	V	L	Y	P	K	Q	F	L	C	L	K	G	D	L	T	M	L	Q	T	T	I	C	R	L	N	G	V	E	C	E	S	P	V	V	I	C	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	Q	H	R	F	I	V	A	E	Q	L
Query Conservation																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	D	F	S	G	E	V	P	Y	Q	A	D	C	V	I	L	A	G	N	A	V	M	P	T	I	D	A	A	C	K	I	A	R	D	Q	Q	I	P	L	L	I	S	G	G	I	G	H	S	T	T	F	L	Y	S	A	I	A	Q	H	P	H	Y	N	T	I	R	T	T	G	R	A	E	A	T	I	L	A	D	I	A
Template Known Secondary structure			T	T	T	T	T						S								S																T									S	S	T	T										T		T	T	G	G	G	S			T	T	S
Template Predicted Secondary structure
Template SS confidence
		27	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.
		73	.	.		.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.
Predicted Secondary structure					.
Query SS confidence					.
Query Sequence		R	Q	L	.	N	K	L	T	E	N	I	I	L	E	P	A	G	R	N	T	A	P	A	I	A	L	A	A	L	A	A	K	R	H	S	P	E	S	D	P	L	M	L	V	L	A	A	D	H	V	I	A	D	E	D	A	F	R	A	A
Query Conservation					.
Alig confidence					.
Template Conservation
Template Sequence		H	Q	F	W	H	I	P	H	E	K	I	W	I	E	D	Q	S	T	N	C	G	E	N	A	R	F	S	I	A	L	L	N	Q	A	V	E	R	V	H	T	A	I	V	V	Q	D	P	T	M	Q	R	R	T	M	A	T	F	R	R	M
Template Known Secondary structure				T	T				G	G	G									S														T		S	S			S								G	G	G
Template Predicted Secondary structure
Template SS confidence
		107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions