Job Description P24174 Confidence 100.00% Date Thu Jan 5 11:40:50 GMT 2012 Rank 16 Aligned Residues 246 % Identity 18% Template c3brkX_ PDB info PDB header:transferase Chain: X: PDB Molecule:glucose-1-phosphate adenylyltransferase; PDBTitle: crystal structure of adp-glucose pyrophosphorylase from2 agrobacterium tumefaciens Resolution 2.10 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
Predicted Secondary structure																																									.																																						.	.	.
Query SS confidence																																									.																																						.	.	.
Query Sequence		M	A	Q	S	K	L	Y	P	V	V	M	A	G	G	S	G	S	R	L	W	P	L	S	R	V	L	Y	P	K	Q	F	L	C	L	K	G	D	L	T	.	M	L	Q	T	T	I	C	R	L	N	G	V	E	C	E	S	P	V	V	I	C	N	E	Q	H	R	F	I	V	A	E	Q	L	R	Q	L	N	.	.	.
Query Conservation																																									.																																						.	.	.
Alig confidence						.																		.														.			.																									.													.	.	.
Template Conservation						.																		.														.																												.
Template Sequence		L	A	R	D	.	A	X	A	Y	V	L	A	G	G	R	G	S	R	L	K	E	L	.	T	D	R	R	A	K	P	A	V	Y	F	G	G	.	K	A	R	I	I	D	F	A	L	S	N	A	L	N	S	G	I	R	R	I	G	V	A	T	Q	Y	K	.	A	H	S	L	I	R	H	L	Q	R	G	W	D	F	F
Template Known Secondary structure		G	G	G	G	.												G	G	G	G	G	G	.	G	S	S	S		G	G	G	S			T	T	.	T			T											T	T										T	T	.												S
Template Predicted Secondary structure						.																		.														.																												.
Template SS confidence
		9	10	.	.		.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.		30	.	.	.	.	.	.	.	.	.	40	.	.		.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
						77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
Predicted Secondary structure		.	.	.	.
Query SS confidence		.	.	.	.
Query Sequence		.	.	.	.	K	L	T	E	N	I	I	L	E	P	A	G	R	N	T	A	P	A	I	A	L	A	A	L	A	A	K	R	H	S	P	E	S	D	P	L	M	L	V	L	A	A	D	H	V	I	A	D	E	D	A	F	R	A	A	V	R	N	A	M	P	Y	A	E	A	G	K	L	V	T	F	G	I	V	P	D
Query Conservation		.	.	.	.
Alig confidence		.	.	.	.																															.	.	.														.	.																		.
Template Conservation																																				.	.	.														.	.																		.
Template Sequence		R	P	E	R	N	E	S	F	D	I	L	P	A	S	W	Y	E	G	T	A	D	A	V	Y	Q	N	I	D	I	I	E	P	Y	A	.	.	.	P	E	Y	X	V	I	L	A	G	D	H	I	Y	.	.	K	X	D	Y	E	Y	X	L	Q	Q	H	V	D	S	G	A	D	.	V	T	I	G	C	L	E	V	P	R
Template Known Secondary structure			G	G	G	T																				T	T									.	.	.		S							S	S				.	.		B		T										T	T		S	.										T
Template Predicted Secondary structure																																				.	.	.														.	.																		.
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.				.	120	.	.	.	.	.	.	.	.	.	130	.			.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.		.	150	.	.	.	.	.	.	.	.
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	P	E	T	G	Y	G	Y	I	R	R	G	E	V	S	A	G	E	Q	D	M	V	A	F	E	V	A	Q	F	V	E	K	P	N	L	E	T	A	Q	A	Y	V	A	S	G	E	Y	Y	W	N	S	G	M	F	L	F	R	A	G	R	Y	L	E	E	L	K	K	Y	R	P	D	I	L	D	A	C	E	K	A	M
Query Conservation
Alig confidence																	.	.	.	.	.	.	.	.	.																						.
Template Conservation																	.	.	.	.	.	.	.	.	.																						.
Template Sequence		X	E	A	T	G	F	G	V	X	H	V	N	E	K	D	.	.	.	.	.	.	.	.	.	E	I	I	D	F	I	E	K	P	A	D	P	P	G	I	P	G	N	E	G	F	.	A	L	A	S	X	G	I	Y	V	F	H	T	K	F	L	X	E	A	V	R	R	D	A	A	D	I	I	P	Y	I	V	E	H	G
Template Known Secondary structure		T	G	G	G	G	S							T	T	S	.	.	.	.	.	.	.	.	.	B							S		S	S				B	T	T	B	T	T		.																				T	S	S					T	T						S
Template Predicted Secondary structure																	.	.	.	.	.	.	.	.	.																						.
Template SS confidence
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180										.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.		.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
		233	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	A	V	D	P	D	L	N	F	I	R	V	D	E	E	A	F	L	A	C	P	E	E	S	V	D	Y	A	V	M	E	R	T	A	D	A	V	V	V	P	M	D	A	G	W	S	D	V	G	S	W	S	S	L	W	E	I
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	A	V	A	H	R	F	A	D	S	C	V	R	S	D	F	E	H	E	P	Y	W	R	D	V	G	T	I	D	A	Y	W	Q	A
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											B				T	T		S	S								S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																									246	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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