Job Description P24174 Confidence 99.44% Date Thu Jan 5 11:40:50 GMT 2012 Rank 71 Aligned Residues 213 % Identity 17% Template c2vshB_ PDB info PDB header:transferase Chain: B: PDB Molecule:2-c-methyl-d-erythritol 4-phosphate PDBTitle: synthesis of cdp-activated ribitol for teichoic acid2 precursors in streptococcus pneumoniae Resolution 2.00 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.		.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.		.	.	80	.	.	.
Predicted Secondary structure																																																	.																										.
Query SS confidence																																																	.																										.
Query Sequence		L	Y	P	V	V	M	A	G	G	S	G	S	R	L	W	P	L	S	R	V	L	Y	P	K	Q	F	L	C	L	K	G	D	L	T	M	L	Q	T	T	I	C	R	L	N	G	V	E	.	C	E	S	P	V	V	I	C	N	E	Q	H	R	F	I	V	A	E	Q	L	R	Q	L	N	K	.	L	T	E	N	I	I
Query Conservation																																																	.																										.
Alig confidence										.	.	.	.	.	.	.	.	.	.	.	.	.	.										.																.																										.
Template Conservation										.	.	.	.	.	.	.	.	.	.	.	.	.	.										.
Template Sequence		I	Y	A	G	I	L	A	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	K	Q	F	L	E	L	G	D	.	R	P	I	L	I	H	T	I	E	K	F	V	L	E	P	S	I	E	K	I	V	V	G	V	H	G	D	W	V	S	H	A	E	D	L	V	D	K	Y	L	P	L	Y	K	E	R	I	I
Template Known Secondary structure										.	.	.	.	.	.	.	.	.	.	.	.	.	.		G	G	G	S			T	T	.													T		T	T										G	G	G													G	G	G	G	G	G
Template Predicted Secondary structure										.	.	.	.	.	.	.	.	.	.	.	.	.	.										.
Template SS confidence
		2	.	.	.	.	.	.	.															10	.	.	.	.	.	.	.	.		.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.		.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure																										.
Query SS confidence																										.
Query Sequence		L	E	P	A	G	R	N	T	A	P	A	I	A	L	A	A	L	A	A	K	R	H	S	P	.	E	S	D	P	L	M	L	V	L	A	A	D	H	V	I	A	D	E	D	A	F	R	A	A	V	R	N	A	M	P	Y	A	E	A	G	K	L	V	T	F	G	I	V	P	D	L	P	E	T	G	Y	G	Y	I	R
Query Conservation																										.
Alig confidence																										.																														.	.	.								.	.	.	.	.	.
Template Conservation																																																								.	.	.								.	.	.	.	.	.
Template Sequence		I	T	K	G	G	A	D	R	N	T	S	I	K	N	I	I	E	A	I	D	A	Y	R	P	L	T	P	E	D	I	V	V	T	H	D	S	V	R	P	F	I	T	L	R	M	I	Q	D	N	I	Q	L	A	Q	.	.	.	N	H	D	A	V	D	T	.	.	.	.	.	.	V	V	E	A	V	D	T	I	V	E
Template Known Secondary structure							S	S																S				T	T								T	T		T	T															.	.	.	S	S	S					.	.	.	.	.	.						S				B
Template Predicted Secondary structure																																																								.	.	.								.	.	.	.	.	.
Template SS confidence
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.				.	.	.	.	.	.	.							.	140	.	.	.	.	.	.	.	.
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	G	E	V	S	A	G	E	Q	D	M	V	A	F	E	V	A	Q	F	V	E	K	P	N	L	E	T	A	Q	A	Y	V	A	S	G	E	Y	Y	W	N	S	G	M	F	L	F	R	A	G	R	Y	L	E	E	L	K	K	Y	R	P	D	I	L	D	A	C	E	K	A	M	S	A	V	D	P	D	L	N	F	I
Query Conservation
Alig confidence							.	.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.																																					.	.	.	.	.	.	.	.
Template Conservation							.	.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.																																					.	.	.	.	.	.	.	.
Template Sequence		S	T	N	G	Q	.	.	.	.	.	.	.	.	.	F	I	T	D	I	P	N	R	A	H	.	.	.	.	.	.	.	.	.	.	.	.	L	Y	Q	G	Q	T	P	Q	T	F	R	C	K	D	F	M	D	L	Y	G	S	L	S	D	E	E	K	E	I	L	T	D	A	C	K	I	.	.	.	.	.	.	.	.
Template Known Secondary structure			S	S	S	S	.	.	.	.	.	.	.	.	.	S		S	B				G	G	G	.	.	.	.	.	.	.	.	.	.	.	.																					T											S					.	.	.	.	.	.	.	.
Template Predicted Secondary structure							.	.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.																																					.	.	.	.	.	.	.	.
Template SS confidence
		149	150	.	.	.										.	.	.	.	.	.	160	.	.	.													.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.
		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	V	D	E	E	A	F	L	A	C	P	E	E	S	V	D	Y	A	V	M	E	R	T	A	D	A	V	V	V	P	M	D	A	G	W	S	D	V	G	S	W	S	S	L	W	E	I
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	V	I	K	G	K	D	V	A	L	A	K	G	E	Y	S	N	L	K	I	T	T	V	T	D	L	K	I	A
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				T	T										T	T						S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																				200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions