Return to main results Retrieve Phyre Job Id

Job DescriptionP24174
Confidence99.47%DateThu Jan 5 11:40:50 GMT 2012
Rank67Aligned Residues85
% Identity16%Templatec2oziA_
PDB info PDB header:structural genomics, unknown functionChain: A: PDB Molecule:hypothetical protein rpa4178; PDBTitle: structural genomics, the crystal structure of a putative2 protein rpa4178 from rhodopseudomonas palustris cga009
Resolution1.15 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   374.....380.........390.........400.........410.........420... ......430.........440.........450
Predicted Secondary structure 





















...












Query SS confidence 

















































. . .


























Query Sequence  GKYDSIDAGDRYQVKRITVKPGEGLSVQMHHHRAEHWVVVAGTAKVTIDG. . . DIKLLGENESIYIPLGATHCLENPGKI
Query Conservation 
    
       

 
 
 

  

 
 
  
 
 
 

 
 
 
    ...         
  

 
  
 
 
 
  
Alig confidence 

















































...


























Template Conservation      
  
     
    
 

     
 
        
  
                  

    
 
  
   
 
  
Template Sequence  AKSEIQIDNDEVRVTEWRLPPGSATGHHTHGXDYVVVPXADGEXTIVAPDGTRSLAQLKTGRSYARKAGVQHDVRNESTA
Template Known Secondary structure 
SSS
TT

S

S
SS

TTS

TT


TT

SSS
Template Predicted Secondary structure 




































Template SS confidence 















































































   5....10.........20.........30.........40.........50.........60.........70.........80....
 
   451.......
Predicted Secondary structure 
Query SS confidence 







Query Sequence  PLDLIEVR
Query Conservation   
  



Alig confidence 







Template Conservation 
   
 

Template Sequence  EIVFLEIE
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 







   85....90..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions