Job Description P24174 Confidence 98.48% Date Thu Jan 5 11:40:50 GMT 2012 Rank 126 Aligned Residues 208 % Identity 14% Template c2oefA_ PDB info PDB header:transferase Chain: A: PDB Molecule:utp-glucose-1-phosphate uridylyltransferase 2, PDBTitle: open and closed structures of the udp-glucose2 pyrophosphorylase from leishmania major Resolution 2.40 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.					.	.	.		.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
Predicted Secondary structure																																																	.	.	.	.				.																						.	.	.	.
Query SS confidence																																																	.	.	.	.				.																						.	.	.	.
Query Sequence		K	L	Y	P	V	V	M	A	G	G	S	G	S	R	L	W	P	L	S	R	V	L	Y	P	K	Q	F	L	C	L	K	G	D	L	T	M	L	Q	T	T	I	C	R	L	N	G	V	.	.	.	.	E	C	E	.	S	P	V	V	I	C	N	E	Q	H	R	F	I	V	A	E	Q	L	R	Q	L	.	.	.	.
Query Conservation																																																	.	.	.	.				.																						.	.	.	.
Alig confidence																	.	.	.	.																													.	.	.	.				.																						.	.	.	.
Template Conservation																	.	.	.	.
Template Sequence		S	T	V	V	L	K	L	N	G	G	L	G	T	G	X	.	.	.	.	G	L	C	D	A	K	T	L	L	E	V	K	D	G	K	T	F	L	D	F	T	A	L	Q	V	Q	Y	L	R	Q	H	C	S	E	H	L	R	F	X	L	X	D	S	F	N	T	S	A	S	T	K	S	F	L	K	A	R	Y	P	W	L
Template Known Secondary structure		T										B	S	G	G	G	.	.	.	.	T			S	B	G	G	G	S				T	T																		T		T	T									T	T	T
Template Predicted Secondary structure																	.	.	.	.
Template SS confidence
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.					90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
																													76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	K	L	T	E	N	I	I	L	E	P	A	G	R	N	T	A	P	A	I	A	L	A	A	L	A	A	K	R	H	S	P	E	S	D	P	L	M	L	V	L	A	A	D	H	V	I	A	D	E	D	A	F
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																				.	.
Template Conservation																																																																																.	.
Template Sequence		Y	Q	V	F	D	S	E	V	E	L	X	Q	N	Q	V	P	K	I	L	Q	D	T	L	E	P	A	A	W	A	E	N	P	A	Y	E	W	A	P	P	G	H	G	D	I	Y	T	A	L	Y	G	S	G	K	L	Q	E	L	V	E	Q	G	Y	R	Y	X	F	V	S	N	G	D	N	L	G	A	T	I	D	.	.
Template Known Secondary structure			T	T					T												T	T	T		S	B				T	T		G	G	G	G						T	T									T	S								T	T									T	T	B	T	T					.	.
Template Predicted Secondary structure																																																																																.	.
Template SS confidence
		151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
		129	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.							.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
Predicted Secondary structure																																				.	.	.	.	.	.
Query SS confidence																																				.	.	.	.	.	.
Query Sequence		R	A	A	V	R	N	A	M	P	Y	A	E	A	G	K	L	V	T	F	G	I	V	P	D	L	P	E	T	G	Y	G	Y	I	R	.	.	.	.	.	.	R	G	E	V	S	A	G	E	Q	D	M	V	A	F	E	V	A	Q	F	V	E	K	P	N	L	E	T	A	Q	A	Y	V	A	S	G	E	Y	Y	W	N
Query Conservation																																				.	.	.	.	.	.
Alig confidence											.	.																								.	.	.	.	.	.
Template Conservation											.	.
Template Sequence		K	R	V	L	A	Y	X	E	K	.	.	E	K	I	D	F	L	X	E	V	C	R	R	T	E	S	D	K	K	G	G	H	L	A	R	Q	T	V	Y	V	K	G	K	D	G	Q	P	D	A	E	K	R	V	L	L	L	R	E	S	A	Q	C	P	K	A	D	X	E	S	F	Q	D	I	N	K	Y	S	F	F	N
Template Known Secondary structure											.	.		T		S										G	G	G	T	T	S														S	S	S													S	T	T	S		T	T	T							T	T	T	S
Template Predicted Secondary structure											.	.
Template SS confidence
		229	230	.	.	.	.	.	.	.			.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.
		203	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220
Predicted Secondary structure
Query SS confidence
Query Sequence		S	G	M	F	L	F	R	A	G	R	Y	L	E	E	L	K	K	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	N	N	L	W	I	R	L	P	V	L	L	E	T	X	Q	E	H
Template Known Secondary structure																			T
Template Predicted Secondary structure
Template SS confidence
		307	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions