Job Description P24174 Confidence 99.94% Date Thu Jan 5 11:40:50 GMT 2012 Rank 27 Aligned Residues 219 % Identity 17% Template c2ggqA_ PDB info PDB header:transferase Chain: A: PDB Molecule:401aa long hypothetical glucose-1-phosphate PDBTitle: complex of hypothetical glucose-1-phosphate thymidylyltransferase from2 sulfolobus tokodaii Resolution 2.00 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	Y	P	V	V	M	A	G	G	S	G	S	R	L	W	P	L	S	R	V	L	Y	P	K	Q	F	L	C	L	K	G	D	L	T	M	L	Q	T	T	I	C	R	L	N	G	V	E	C	E	S	P	V	V	I	C	N	E	Q	H	R	F	I	V	A	E	Q	L	R	Q	L	N	K	L	T	E	N	I	I	L	E
Query Conservation
Alig confidence																			.														.																																								.	.	.	.
Template Conservation																			.														.																																								.	.	.	.
Template Sequence		M	K	A	F	I	L	A	A	G	S	G	E	R	L	E	P	I	.	T	H	T	R	P	K	A	F	V	P	I	L	S	.	K	P	L	I	E	Y	Q	I	E	Y	L	R	K	C	G	I	R	D	I	T	V	I	V	S	S	K	N	K	E	Y	F	E	K	K	L	K	E	I	S	.	.	.	.	I	V	T	Q	K
Template Known Secondary structure													G	G	G	T	T	G	.	G	G	T	S		G	G	G				T	T	.														T	T										G	G	G									T	T	S		.	.	.	.
Template Predicted Secondary structure																			.														.																																								.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.		.	.	20	.	.	.	.	.	.	.	.	.	30		.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.					70	.	.	.	.
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	A	G	R	N	T	A	P	A	I	A	L	A	A	L	A	A	K	R	H	S	P	E	S	D	P	L	M	L	V	L	A	A	D	H	V	I	A	D	E	D	A	F	R	A	A	V	R	N	A	M	P	Y	A	E	A	G	K	L	V	T	F	G	I	V	P	D	L	P	E	T	G	Y	G	Y	I	R	R	G	E
Query Conservation
Alig confidence												.	.	.	.	.	.	.	.	.																														.	.	.	.	.												.	.	.
Template Conservation												.	.	.	.	.	.	.	.	.																														.	.	.	.	.												.	.	.
Template Sequence		D	D	I	K	G	T	G	A	A	I	.	.	.	.	.	.	.	.	.	L	S	A	K	F	N	D	E	A	L	I	I	Y	G	D	L	F	F	S	N	E	K	E	I	C	N	I	I	T	.	.	.	.	.	L	K	E	N	A	I	I	G	V	K	V	.	.	.	S	N	P	K	D	Y	G	V	L	V	L	D	N
Template Known Secondary structure		T	T			S						.	.	.	.	.	.	.	.	.	T	T				S	S							T	T				S		S							T	T	.	.	.	.	.		S	S									.	.	.	S		T	T	S	S							T
Template Predicted Secondary structure												.	.	.	.	.	.	.	.	.																														.	.	.	.	.												.	.	.
Template SS confidence
		75	.	.	.	.	80	.	.	.	.										.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.						.	.	.	.	.	.	120	.	.	.	.				.	.	.	.	.	130	.	.	.	.	.	.	.
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	S	A	G	E	Q	D	M	V	A	F	E	V	A	Q	F	V	E	K	P	N	L	E	T	A	Q	A	Y	V	A	S	G	E	Y	Y	W	N	S	G	M	F	L	F	R	A	G	R	Y	L	E	E	L	K	K	Y	R	P	D	I	L	D	A	C	E	K	A	M	S	A	V	D	P	D	L	N	F	I	R	V	D
Query Conservation
Alig confidence				.	.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation				.	.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Q	N	.	.	.	.	.	.	.	.	.	N	L	S	K	I	I	E	K	P	E	.	.	.	.	.	.	.	.	I	P	P	S	N	L	I	N	A	G	I	Y	K	L	N	S	D	I	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	Y	L	D	K	I	S	I	S	E	R	G	E	L	E	L
Template Known Secondary structure		T	S	.	.	.	.	.	.	.	.	.	B							S		S	.	.	.	.	.	.	.	.	S		S		S											T	T			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										T	T	S	S
Template Predicted Secondary structure				.	.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		138	.										140	.	.	.	.	.	.	.	.	.									150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.																	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.
		246	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290
Predicted Secondary structure
Query SS confidence
Query Sequence		E	E	A	F	L	A	C	P	E	E	S	V	D	Y	A	V	M	E	R	T	A	D	A	V	V	V	P	M	D	A	G	W	S	D	V	G	S	W	S	S	L	W	E	I	S
Query Conservation
Alig confidence								.	.	.	.	.	.	.	.	.	.
Template Conservation								.	.	.	.	.	.	.	.	.	.
Template Sequence		T	D	A	I	N	L	.	.	.	.	.	.	.	.	.	.	M	A	K	D	H	R	V	K	V	I	E	Y	E	G	Y	W	M	D	I	G	K	P	W	N	I	I	D	V	N
Template Known Secondary structure								.	.	.	.	.	.	.	.	.	.					S									S							S
Template Predicted Secondary structure								.	.	.	.	.	.	.	.	.	.
Template SS confidence
		185	.	.	.	.	190											.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions