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Job DescriptionP24174
Confidence88.10%DateThu Jan 5 11:40:50 GMT 2012
Rank193Aligned Residues170
% Identity11%Templatec2ffuA_
PDB info PDB header:transferaseChain: A: PDB Molecule:polypeptide n-acetylgalactosaminyltransferase 2; PDBTitle: crystal structure of human ppgalnact-2 complexed with udp2 and ea2
Resolution1.64 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   32...... .40.........50.... .....60.........70.........80.........90.........100......
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Query Sequence  LCLKGDL. TMLQTTICRLNGVECE. . . . SPVVICNEQHRFIVAEQLRQLNKLTENIILEPAGRNTAPAIALAALAAKRHS
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Template Sequence  ITFHNEARSALLRTVVSVLKKSPPHLIKEIILVDDYSNDPEDGALLGKIE. . KVRVLRNDRREGLMRSRVRGADAAQ. . .
Template Known Secondary structure  SS

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   142.......150.........160.........170.........180.........190. ........200.........210......
 
   107..110.........120.........130.........140.........150.........160.........170.........180......
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Query Sequence  PESDPLMLVLAADHVIADEDAFRAAVRNAMPYAEAGKLVTFGIVPDLPETGYGYIRRGEVSAGEQDMVAFEVAQFVEKPN
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Template Sequence  . . . AKVLTFLDSHCEC. NEHWLEPLLERVA. . . EDRTRVVSPIIDVINMDNFQYVGASADLKGGFDWNLVF. . KWDYMTP
Template Known Secondary structure  ...SS

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   217..220......... 230.........240.. .......250.........260.........270.........280 .......
 
   187..190.........200. ........210.....
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Query Sequence  LETAQAYVASGEYYW. . . . NSGMFLFRAGRYLE
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Template Sequence  EQRRSRQGNPVAPIKTPMIAGGLFVMDKFYFEE
Template Known Secondary structure  TSS
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   288.290.........300.........310.........320
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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