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Job DescriptionP24174
Confidence80.54%DateThu Jan 5 11:40:50 GMT 2012
Rank204Aligned Residues169
% Identity12%Templatec2d7iA_
PDB info PDB header:transferaseChain: A: PDB Molecule:polypeptide n-acetylgalactosaminyltransferase 10; PDBTitle: crsytal structure of pp-galnac-t10 with udp, galnac and mn2+
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   32...... .40.........50.... ..... 60.........70.........80.........90.........100..
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Query Sequence  LCLKGDL. TMLQTTICRLNGVECE. . . . SPVVI. . . . CNEQHRFIVAEQLRQLNKLTENIILEPAGRNTAPAIALAALAA
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Template Sequence  IPFHNEGWSSLLRTVHSVLNRSPPELVAEIVLVDDFSDREHLKKPLEDYMALFP. . SVRILRTKKREGLIRTRMLGASVA
Template Known Secondary structure  SS

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GGGTTTST..T
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   151........160.........170.........180.........190.........200.... .....210.........220........
 
   103......110.........120.........130.........140.........150.........160.........170.........180..
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Query Sequence  KRHSPESDPLMLVLAADHVIADEDAFRAAVRNAMPYAEAGKLVTFGIVPDLPETGYGYIRRGEVSAGEQDMVAFEVAQFV
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Template Sequence  T. . . . . . GDVITFLDSHCEA. NVNWLPPLLDRIA. . . RNRKTIVCPMIDVIDHDDFRYETQAGDAMR. . . GAFDWEMYYK
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   229 230.........240.. .......250..... ....260.........270.........280..... ....290.....
 
   183......190......... 200.........210.....
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Query Sequence  EKPNLETAQAYVASGEY. . . YWNSGMFLFRAGRYLE
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Template Sequence  RIPIPPELQKADPSDPFESPVMAGGLFAVDRKWFWE
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   296...300.........310.........320.........330.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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